Jatropha Genome Database

JcCB0568861.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0568861.10 - phase: 1 /pseudo/partial
         (565 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29929.m004583 isopentenyl-diphosphate delta isomerase, putative       266   1e-70

>29929.m004583 isopentenyl-diphosphate delta isomerase, putative
          Length = 945

 Score =  266 bits (134), Expect = 1e-70
 Identities = 170/182 (93%)
 Strand = Plus / Plus

                                                                       
Query: 326 caacgctctgcaacaaaggtcacattcccccttgtgtggacaaacacttgctgcagtcat 385
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 451 caacgctctgcaacaaaggtgacattcccccttgtgtggacaaacacttgctgcagtcat 510

                                                                       
Query: 386 cctttgtaccgtgattctgagcttatcgaagagaatgctcttggtgtgaggaatgctgca 445
           ||||| || ||||| ||||||||||| || ||| || ||||||||||||| |||||||| 
Sbjct: 511 cctttatatcgtgaatctgagcttattgaggaggattctcttggtgtgagaaatgctgcg 570

                                                                       
Query: 446 caaaggaagcttttggatgagcttggtatccctgctgaagatgttccagttgatcagttt 505
           |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 571 caaaggaagcttttggatgagcttggcatccctgctgaagatgtcccagttgatcagttt 630

             
Query: 506 ac 507
           ||
Sbjct: 631 ac 632