Jatropha Genome Database
- JcCB0555631.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0555631.10 - phase: 1 /pseudo/partial
(872 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29869.m001185 hypothetical protein 274 8e-73
29869.m001184 transcription factor, putative 264 8e-70
29869.m001187 hypothetical protein 224 7e-58
29869.m001189 hypothetical protein 194 6e-49
29869.m001188 hypothetical protein 70 2e-11
>29869.m001185 hypothetical protein
Length = 1782
Score = 274 bits (138), Expect = 8e-73
Identities = 219/246 (89%)
Strand = Plus / Plus
Query: 468 aagtcagaaaattttcatgataagggacaacaaatggaggtccaagtagaagtggctcaa 527
|||||||||| | |||||| |||||||| || |||||||||||||| ||||| ||||||
Sbjct: 1351 aagtcagaaactagtcatgacaagggacagcagatggaggtccaagtggaagtagctcaa 1410
Query: 528 atagatggaaatgagttctttgtaaaggtattttgtgagcataaggcaggtgggtttgtg 587
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||
Sbjct: 1411 atagatggaaatgagttctttgtaaaggtattttgtgagcataaggcaggaggatttatg 1470
Query: 588 agattaatggaggcattggattctcttggcttagaagttaccaacgtcaatgtaacaagc 647
| | | |||||||| ||||||| |||||| ||||||||||| || | ||||||||| |||
Sbjct: 1471 aaactgatggaggctttggattgtcttgggttagaagttacaaatgccaatgtaaccagc 1530
Query: 648 tgcagaggccttgtctcaaatgttttcaaagtagagaagaaggatagtgaaatggttcaa 707
| ||||||||||||||||||||||||||||| ||||| |||||||| |||||||| |||
Sbjct: 1531 tttagaggccttgtctcaaatgttttcaaagttgagaaaaaggatagcgaaatggtgcaa 1590
Query: 708 gcagat 713
||||||
Sbjct: 1591 gcagat 1596
Score = 101 bits (51), Expect = 7e-21
Identities = 117/139 (84%)
Strand = Plus / Plus
Query: 168 ttgatgacgaaaatgatgctaaatatatgagaagaacaggaagaaaacctgaagctaaaa 227
||||||| || |||||||| || |||| ||||||||| |||||| ||| ||||||||
Sbjct: 980 ttgatgatgagaatgatgcgaagtataggagaagaactggaagaggtcctccagctaaaa 1039
Query: 228 atcttcatgctgaaagaaagagaaggaaaaggcttaatgggagactctatgatctacgtg 287
||||| | ||||| || | ||||||||||||||||||||| || || |||||| || | |
Sbjct: 1040 atcttaaggctgagaggaggagaaggaaaaggcttaatggcaggctatatgatttaaggg 1099
Query: 288 ccttggttcccaaaatttc 306
|||||||||||||||||||
Sbjct: 1100 ccttggttcccaaaatttc 1118
>29869.m001184 transcription factor, putative
Length = 1731
Score = 264 bits (133), Expect = 8e-70
Identities = 247/285 (86%)
Strand = Plus / Plus
Query: 482 tcatgataagggacaacaaatggaggtccaagtagaagtggctcaaatagatggaaatga 541
|||||| |||||||| || |||||||||||||| ||||| |||||||||||||||||| |
Sbjct: 1335 tcatgacaagggacagcagatggaggtccaagtggaagtagctcaaatagatggaaataa 1394
Query: 542 gttctttgtaaaggtattttgtgagcataaggcaggtgggtttgtgagattaatggaggc 601
||||||||||||||||||||||||||||||| |||| || ||| ||| | | ||||||||
Sbjct: 1395 gttctttgtaaaggtattttgtgagcataagacaggaggatttatgaaactcatggaggc 1454
Query: 602 attggattctcttggcttagaagttaccaacgtcaatgtaacaagctgcagaggccttgt 661
||||||| |||||| ||||||||||| || | ||||||||| |||| |||||||||||
Sbjct: 1455 tttggattgtcttgggttagaagttacaaatgccaatgtaaccagctttagaggccttgt 1514
Query: 662 ctcaaatgttttcaaagtagagaagaaggatagtgaaatggttcaagcagattatgtgag 721
|||| |||||||||||| ||||| ||||| || ||||||||||||||||| ||||| ||
Sbjct: 1515 ttcaattgttttcaaagttgagaaaaaggacagcgaaatggttcaagcagactatgtaag 1574
Query: 722 gaactctttgttagagctaacaagagaccatccaagaggatggcc 766
| |||||| ||||||| ||| |||||| ||||||||||||||
Sbjct: 1575 agagtctttgctagagctgacacgagacccgccaagaggatggcc 1619
Score = 63.9 bits (32), Expect = 1e-09
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 247 gagaaggaaaaggcttaatgggagactctatgatctacgtgccttggttcccaaaatttc 306
|||||||||||||||||| || || || |||||| || | ||||||||||||||||||||
Sbjct: 1029 gagaaggaaaaggcttaacggcaggctatatgatttaagggccttggttcccaaaatttc 1088
>29869.m001187 hypothetical protein
Length = 492
Score = 224 bits (113), Expect = 7e-58
Identities = 200/229 (87%)
Strand = Plus / Plus
Query: 482 tcatgataagggacaacaaatggaggtccaagtagaagtggctcaaatagatggaaatga 541
|||||| |||||||| || |||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 96 tcatgacaagggacagcagatggaggtccaagtggaagtagctcaaatagatggaaatga 155
Query: 542 gttctttgtaaaggtattttgtgagcataaggcaggtgggtttgtgagattaatggaggc 601
|||||||||||||||||||| |||||||||| || | || ||| ||| | | ||||||||
Sbjct: 156 gttctttgtaaaggtattttatgagcataagacaagaggatttatgaaactcatggaggc 215
Query: 602 attggattctcttggcttagaagttaccaacgtcaatgtaacaagctgcagaggccttgt 661
||||||| ||| || ||||||| ||| || | ||||||||| |||| |||||||||||
Sbjct: 216 tttggattgtctcgggttagaagctacaaatgccaatgtaactagctttagaggccttgt 275
Query: 662 ctcaaatgttttcaaagtagagaagaaggatagtgaaatggttcaagca 710
|||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 276 ctcaaatgttttcaaagttgagaagaaggataacaaaatggttcaagca 324
>29869.m001189 hypothetical protein
Length = 1086
Score = 194 bits (98), Expect = 6e-49
Identities = 143/158 (90%)
Strand = Plus / Plus
Query: 522 gctcaaatagatggaaatgagttctttgtaaaggtattttgtgagcataaggcaggtggg 581
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 832 gctcaaatagatggaaatgagttctttgtaaaggtattttgtgagcataaggcaggacga 891
Query: 582 tttgtgagattaatggaggcattggattctcttggcttagaagttaccaacgtcaatgta 641
||| ||| | | |||||||| ||||||| |||||| |||||||||||||| | |||||||
Sbjct: 892 tttatgaaactgatggaggctttggattgtcttgggttagaagttaccaatgccaatgta 951
Query: 642 acaagctgcagaggccttgtctcaaatgttttcaaagt 679
|| |||| |||||||||||||||||||||||||||||
Sbjct: 952 accagctttagaggccttgtctcaaatgttttcaaagt 989
Score = 65.9 bits (33), Expect = 4e-10
Identities = 111/137 (81%)
Strand = Plus / Plus
Query: 170 gatgacgaaaatgatgctaaatatatgagaagaacaggaagaaaacctgaagctaaaaat 229
||||| || ||||| || || |||| ||||||||| |||||| ||| ||||||| ||
Sbjct: 517 gatgatgagaatgacgcgaagtataggagaagaactggaagaggtcctccagctaaagat 576
Query: 230 cttcatgctgaaagaaagagaaggaaaaggcttaatgggagactctatgatctacgtgcc 289
||| | ||||| || | ||||||||||| |||||||| || || |||||| || | |||
Sbjct: 577 cttaaggctgagaggaggagaaggaaaatgcttaatgacaggctatatgatttaagggcc 636
Query: 290 ttggttcccaaaatttc 306
|||||||||||||||||
Sbjct: 637 ttggttcccaaaatttc 653
>29869.m001188 hypothetical protein
Length = 285
Score = 69.9 bits (35), Expect = 2e-11
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 224 aaaaatcttcatgctgaaagaaagagaaggaaaaggcttaatgggagactctatgatcta 283
|||||| || |||| || |||| ||||||||||||| ||||||| || || |||||| ||
Sbjct: 103 aaaaatattgatgcagagagaaggagaaggaaaaggtttaatggtaggctatatgattta 162
Query: 284 cgtgccttggttcccaaaatttc 306
| ||||||||||||||||||||
Sbjct: 163 agggccttggttcccaaaatttc 185