Jatropha Genome Database
- JcCB0551561.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0551561.10 - phase: 0
(1251 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29662.m000472 Auxin efflux carrier component, putative 676 0.0
29816.m000677 Auxin efflux carrier component, putative 52 8e-06
>29662.m000472 Auxin efflux carrier component, putative
Length = 1907
Score = 676 bits (341), Expect = 0.0
Identities = 705/826 (85%), Gaps = 9/826 (1%)
Strand = Plus / Plus
Query: 20 tttacgatgttattgctgctattgtgcctctatatgttgctatgatactagcctatggat 79
||||||||||| ||||||| ||||| || ||||||||||||||||||| ||||| || |
Sbjct: 20 tttacgatgttcttgctgccattgttcccttatatgttgctatgatacttgcctacggct 79
Query: 80 cagttcggtggtggaaaatcttcacgccggaccaatgctccggtattaaccgtttcgtgg 139
| ||||| |||||||| |||||||| ||||| || || || || ||||||||||| || |
Sbjct: 80 cggttcgatggtggaagatcttcaccccggatcagtgttctgggattaaccgttttgtcg 139
Query: 140 cagtgttcgcagttccactactctctttccatttcatctcatcaaacgacccatatgcca 199
| ||||| || ||||| |||||||||||||||||||||| || ||||| || |||||||
Sbjct: 140 ctgtgtttgctgttcctttactctctttccatttcatctcttctaacgatccttatgcca 199
Query: 200 tgaactatcggttcattgcagccgattctctccaaaaagtagtgatccttgctgctcttt 259
|||||||||| |||||||| || ||||||||||| |||||||| || || ||||| || |
Sbjct: 200 tgaactatcgcttcattgctgctgattctctccagaaagtagtcattctggctgcactat 259
Query: 260 ttctctggcaagcttttagcaaaaatggaagtcttgaatggatgatcactctcttctctc 319
|||| ||||||||||||||||||| ||| || |||||||||||||| |||||||||||||
Sbjct: 260 ttctttggcaagcttttagcaaaagtggcagccttgaatggatgattactctcttctctc 319
Query: 320 tttctaccctcccaaacactctggtcatgggtattcctctcttgaaagccatgtatggag 379
| ||||| ||||| || |||||||||||||| || ||||| ||||| |||||||| ||||
Sbjct: 320 tatctactctccccaatactctggtcatgggaatccctcttttgaaggccatgtacggag 379
Query: 380 atttctctggaagtcttatggttcaaattgtagtgttgcaaagtgtaatttggtatactc 439
| || || || |||||||||||||||||||| ||| |||| |||||||||||||||||||
Sbjct: 380 aattttcaggtagtcttatggttcaaattgtggtgctgcagagtgtaatttggtatactc 439
Query: 440 ttatgctcttcatgtttgaatacagaggagccaagttactaatttctgaccaattccctg 499
|||||||||| ||||||||||| |||||||| |||||||| || || || ||||||||||
Sbjct: 440 ttatgctctttatgtttgaatatagaggagcaaagttactcatctccgagcaattccctg 499
Query: 500 agacagctggatctattacctccttcaaagttgattctgatgttgtttcacttaatggta 559
| || || || ||||||||||| |||| ||||||||||||||| ||||| || || |||
Sbjct: 500 aaactgcggggtctattacctctttcagagttgattctgatgtcgtttctctcaacggtc 559
Query: 560 gagaaccattacaagccgatgctgagatcggggatgatggtaaacttcatgtcgttgtta 619
| |||||||| ||||| |||||||||||||| || |||||||| || ||||| |||||||
Sbjct: 560 gggaaccattgcaagcagatgctgagatcggtgacgatggtaagctccatgtggttgtta 619
Query: 620 gaagatcttctgcatcttcaatggtttcctcctttaacaagtcgcatggact---atcaa 676
||||||| | ||||| |||||||| || ||||||||||| || || ||||| ||||
Sbjct: 620 aaagatctacagcatcgtcaatggtgtcttcctttaacaaatcacaaggactgaactcaa 679
Query: 677 ------ccatgacaccaagagcttccaacctaaccggtgttgagatctattcagtacaat 730
|||||||||| |||||||| || ||||| ||||| |||||||| ||||| ||||
Sbjct: 680 taacttccatgacaccgagagcttcgaatctaacaggtgtagagatctactcagtgcaat 739
Query: 731 cttctcgagagccaacgccaagagcttcaagttttaaccagacagatttttatgctatgt 790
||||| |||||||||| ||||| |||||||| |||||||||||||| |||||||| ||||
Sbjct: 740 cttctagagagccaacaccaagggcttcaagctttaaccagacagacttttatgccatgt 799
Query: 791 tgtcaagcaaggttgcaagtccaaaacatggatacacaaatagttt 836
| | || |||| |||||||||||||||||||||||||||||||||
Sbjct: 800 ttgctagtaaggctgcaagtccaaaacatggatacacaaatagttt 845
Score = 113 bits (57), Expect = 3e-24
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 1096 ctccatatgttcgtgtggagctcaagtgcctcaccagtttctgaagggaatctcagacat 1155
||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1093 ctccacatgttcgtttggagctcaagtgcctctccagtttctgaagggaatctcagacat 1152
Query: 1156 gcagttaat 1164
|||||||||
Sbjct: 1153 gcagttaat 1161
>29816.m000677 Auxin efflux carrier component, putative
Length = 1941
Score = 52.0 bits (26), Expect = 8e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 68 tagcctatggatcagttcggtggtggaaaatcttcacgccggaccaatgctccggtatta 127
|||||||||| || || |||||||||||||| |||| || ||||| || |||||||| |
Sbjct: 68 tagcctatggctctgtacggtggtggaaaatattcagccctgaccagtgttccggtatca 127
Query: 128 accgtttcgt 137
|||| |||||
Sbjct: 128 accggttcgt 137