Jatropha Genome Database
- JcCB0551261.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0551261.10 - phase: 0
(999 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29830.m001441 undecaprenyl diphosphate synthase, putative 287 6e-77
28565.m000331 undecaprenyl diphosphate synthase, putative 143 2e-33
28565.m000330 undecaprenyl diphosphate synthase, putative 131 9e-30
28565.m000328 undecaprenyl diphosphate synthase, putative 127 1e-28
>29830.m001441 undecaprenyl diphosphate synthase, putative
Length = 1146
Score = 287 bits (145), Expect = 6e-77
Identities = 259/297 (87%)
Strand = Plus / Plus
Query: 101 tgggacccatccccagccattttgctttcataatggatggaaatcgtaggtatgctaaga 160
||||||| ||||||| ||| |||| ||||| |||||||||||||| ||||| |||||||
Sbjct: 89 tgggaccaatccccaatcatattgccttcattatggatggaaatcggaggtacgctaaga 148
Query: 161 aggggaacttgaaactaggtgctggtcatcaggctggatttgagtctcttatatccatac 220
||| |||| ||||| ||| ||||||||| ||||||||| |||||||||| ||||
Sbjct: 149 aggagaacatgaaagaaggggctggtcatagagctggattttcagctcttatatctatac 208
Query: 221 ttatgtactgctatgaattgggagtaaagtatgtaactatctatgcctttagcattgata 280
||| |||||| ||||||||||| ||||||||||||||| | |||||||||||||||||||
Sbjct: 209 ttaagtactgttatgaattgggggtaaagtatgtaactgtttatgcctttagcattgata 268
Query: 281 attttaagaggcggccagatgaggttaaggacctgatggatctgatgctagaaaagattg 340
||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||||||||
Sbjct: 269 attttaaaaggcggccagatgaggttcaggaccttatggatcttatgctagaaaagattg 328
Query: 341 acgagatgctcaaggaagaaagcatggcgaagcaatatggaatcagagtatatttta 397
| ||| ||||||| |||||||| || | ||| ||||||||||||||||| |||||||
Sbjct: 329 aagagttgctcaaagaagaaagtattgtgaaccaatatggaatcagagtgtatttta 385
Score = 194 bits (98), Expect = 7e-49
Identities = 188/218 (86%)
Strand = Plus / Plus
Query: 570 tgaagagagtgagaagatgcaaggagagtgttctatgataaaactggtagacattgagaa 629
||||||||||||||||||||| || | |||||| | ||||| ||||||||||||||||
Sbjct: 798 tgaagagagtgagaagatgcagggggcatgttctcttataaagctggtagacattgagag 857
Query: 630 gtacatgtacatggcagtagctcctgagcctgacattcttgttcgaagttctggagagac 689
||||||||||||| |||||||||||||||||||| || | |||||||||||||| ||
Sbjct: 858 aaacatgtacatggctgtagctcctgagcctgacatcctgatccgaagttctggagaaac 917
Query: 690 ccgtcttagcaacttcttactttggcagtctagtaactgcctgttgtattctcctgatgc 749
||| | ||||||||| ||||||||||| ||||| | ||| ||||||||||||| |||||
Sbjct: 918 ccgcttaagcaacttcctactttggcaggctagtgattgcatgttgtattctccagatgc 977
Query: 750 attatggccagaaattggtttatggcacttggtttggg 787
||| ||||||||||||||||| ||||||||| ||||
Sbjct: 978 attgtggccagaaattggtttccagcacttggtgtggg 1015
>28565.m000331 undecaprenyl diphosphate synthase, putative
Length = 1092
Score = 143 bits (72), Expect = 2e-33
Identities = 174/208 (83%)
Strand = Plus / Plus
Query: 99 catgggacccatccccagccattttgctttcataatggatggaaatcgtaggtatgctaa 158
|||||| ||||| ||||| ||| || | |||||||||||||||||||| |||| | ||||
Sbjct: 63 catgggtcccattcccagtcatctttcgttcataatggatggaaatcggaggtttactaa 122
Query: 159 gaaggggaacttgaaactaggtgctggtcatcaggctggatttgagtctcttatatccat 218
||||| |||| |||||| ||| |||||| || |||||| ||| ||||||| |||||
Sbjct: 123 gaaggagaacctgaaaccaggggctggttatagggctgggtttttagctcttatgtccat 182
Query: 219 acttatgtactgctatgaattgggagtaaagtatgtaactatctatgcctttagcattga 278
|||| |||||||||||| ||||| || ||| |||||||||| | ||||||| |||||||
Sbjct: 183 gcttaagtactgctatgagttgggggtgaagcatgtaactatttttgcctttggcattga 242
Query: 279 taattttaagaggcggccagatgaggtt 306
||||||||| ||||| || |||||||||
Sbjct: 243 taattttaaaaggcgacctgatgaggtt 270
Score = 85.7 bits (43), Expect = 5e-16
Identities = 136/167 (81%)
Strand = Plus / Plus
Query: 600 ttctatgataaaactggtagacattgagaagtacatgtacatggcagtagctcctgagcc 659
|||||| ||||| | |||||| | |||||| ||||| |||||||||||||||||| ||
Sbjct: 846 ttctatcataaagcaggtagatctcgagaagcacatgcccatggcagtagctcctgatcc 905
Query: 660 tgacattcttgttcgaagttctggagagacccgtcttagcaacttcttactttggcagtc 719
||| || || | |||| || || ||||||||||| ||||||||| ||||||||||| |
Sbjct: 906 tgatatactgatccgaacatcaggggagacccgtctgagcaacttcctactttggcaggc 965
Query: 720 tagtaactgcctgttgtattctcctgatgcattatggccagaaattg 766
| || |||||| ||||||||| |||||||| |||||||| ||||
Sbjct: 966 tggtgactgccaagggtattctccggatgcattgtggccagacattg 1012
>28565.m000330 undecaprenyl diphosphate synthase, putative
Length = 1113
Score = 131 bits (66), Expect = 9e-30
Identities = 195/238 (81%)
Strand = Plus / Plus
Query: 128 tcataatggatggaaatcgtaggtatgctaagaaggggaacttgaaactaggtgctggtc 187
||||||||||||||||||| |||| | ||||||||| |||| |||| | ||| ||||||
Sbjct: 116 tcataatggatggaaatcggaggtttactaagaaggagaacctgaagccaggggctggtt 175
Query: 188 atcaggctggatttgagtctcttatatccatacttatgtactgctatgaattgggagtaa 247
|| |||||| ||| ||||||| ||||| |||| |||||||||||| ||||| || |
Sbjct: 176 atagggctgggttttcagctcttatgtccatgcttaagtactgctatgagttgggggtga 235
Query: 248 agtatgtaactatctatgcctttagcattgataattttaagaggcggccagatgaggtta 307
|||||||||| || | ||||||| |||||||||||||||| ||||| | |||||||||
Sbjct: 236 agtatgtaaccatttttgcctttggcattgataattttaaaaggcgatctgatgaggttc 295
Query: 308 aggacctgatggatctgatgctagaaaagattgacgagatgctcaaggaagaaagcat 365
||| | |||||||| ||||| || |||| | | |||||||||||||||||||||
Sbjct: 296 aggttataatggatctaatgctggagaagactttggggatgctcaaggaagaaagcat 353
Score = 101 bits (51), Expect = 8e-21
Identities = 135/163 (82%)
Strand = Plus / Plus
Query: 626 agaagtacatgtacatggcagtagctcctgagcctgacattcttgttcgaagttctggag 685
||||| ||||||||||||||||||||||||| ||||| || || | |||| | | || |
Sbjct: 893 agaagcacatgtacatggcagtagctcctgaccctgatatactgatccgaactgcggggg 952
Query: 686 agacccgtcttagcaacttcttactttggcagtctagtaactgcctgttgtattctcctg 745
|||||||||| ||||||||| ||||||||||| || || |||||| |||||||||| |
Sbjct: 953 agacccgtctgagcaacttcctactttggcaggctggtgactgcccactgtattctccgg 1012
Query: 746 atgcattatggccagaaattggtttatggcacttggtttgggc 788
||| | | |||||||| ||||| || | ||||||||||||||
Sbjct: 1013 atgtactgtggccagagtttggtctacgacacttggtttgggc 1055
>28565.m000328 undecaprenyl diphosphate synthase, putative
Length = 996
Score = 127 bits (64), Expect = 1e-28
Identities = 143/164 (87%), Gaps = 4/164 (2%)
Strand = Plus / Plus
Query: 131 taatggatggaaatcgtaggtatgctaagaaggggaa-cttgaaactaggtgctggtcat 189
|||||||||||||||| |||| ||||||||||| ||| || ||||| ||| |||||||||
Sbjct: 95 taatggatggaaatcggaggtttgctaagaaggagaatctggaaac-aggggctggtcat 153
Query: 190 caggctggat-ttgagtctcttatatccatacttatgtactgctatgaattgggagtaaa 248
||||||| | || || |||||||| ||||||||| |||||||||||| ||| | || ||
Sbjct: 154 aaggctgggtcttcag-ctcttataaccatacttaagtactgctatgatttgagggtgaa 212
Query: 249 gtatgtaactatctatgcctttagcattgataattttaagaggc 292
|||||||||| ||||||||||||||||||| |||||||| ||||
Sbjct: 213 gtatgtaactgtctatgcctttagcattgagaattttaacaggc 256
Score = 103 bits (52), Expect = 2e-21
Identities = 130/156 (83%)
Strand = Plus / Plus
Query: 633 catgtacatggcagtagctcctgagcctgacattcttgttcgaagttctggagagacccg 692
|||||||||||||||||||||||| ||||| || || | |||| || || ||||||||
Sbjct: 783 catgtacatggcagtagctcctgaccctgatatactgatccgaacatcgggggagacccg 842
Query: 693 tcttagcaacttcttactttggcagtctagtaactgcctgttgtattctcctgatgcatt 752
||| ||||||||| ||||||||||| |||||||||||| |||||||||| |||| | |
Sbjct: 843 tctgagcaacttcctactttggcaggctagtaactgcccactgtattctccggatgtact 902
Query: 753 atggccagaaattggtttatggcacttggtttgggc 788
|||||||| |||| || | ||||||||||||||
Sbjct: 903 gtggccagagtttggcctacgacacttggtttgggc 938