Jatropha Genome Database

JcCB0550651.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0550651.10 - phase: 0 /partial
         (273 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30008.m000797 3-isopropylmalate dehydratase, putative                 365   e-101
30008.m000798 3-isopropylmalate dehydratase, putative                 168   1e-41

>30008.m000797 3-isopropylmalate dehydratase, putative
          Length = 1533

 Score =  365 bits (184), Expect = e-101
 Identities = 247/268 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtgcctccaactttgagatttgtaatggatggtgaaatgcctgattatttgcttgcaaag 60
           ||||| |||||| |||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 700 gtgcccccaactctgagatttgtaatggatggtgaaatgcctgattatttgctagccaag 759

                                                                       
Query: 61  gatttgattttacagattattggtgaaatatctgtagctggtgcaacatataaatcaatg 120
           ||||||||||| || ||||| ||||||||||||||  |||||||||||||||||||||||
Sbjct: 760 gatttgattttgcaaattatcggtgaaatatctgtgtctggtgcaacatataaatcaatg 819

                                                                       
Query: 121 gagtttgtcggcacaactgttgagagtttaaatatggaagagcggatgacattgtgtaac 180
           |||||||| ||||||||||| |||||||||||||||||||| ||||||||| | ||||| 
Sbjct: 820 gagtttgtaggcacaactgtcgagagtttaaatatggaagaacggatgacactatgtaat 879

                                                                       
Query: 181 atggttgttgaagctggggggaagaatggggttgtccctgctgatagcactacattcaag 240
           ||||||||||||||||||||||||||||||||  ||||   |||||||||||||||||||
Sbjct: 880 atggttgttgaagctggggggaagaatggggtcatccccagtgatagcactacattcaag 939

                                       
Query: 241 taccttgaggataagacatctgtgccct 268
           ||||||||||||||||||||||| ||||
Sbjct: 940 taccttgaggataagacatctgttccct 967


>30008.m000798 3-isopropylmalate dehydratase, putative
          Length = 1866

 Score =  168 bits (85), Expect = 1e-41
 Identities = 109/117 (93%)
 Strand = Plus / Plus

                                                                        
Query: 154  atggaagagcggatgacattgtgtaacatggttgttgaagctggggggaagaatggggtt 213
            |||||||||||||||||||| |||||||||||| |||||||||| || ||||||||||| 
Sbjct: 1186 atggaagagcggatgacattatgtaacatggttattgaagctggaggaaagaatggggtc 1245

                                                                     
Query: 214  gtccctgctgatagcactacattcaagtaccttgaggataagacatctgtgccctat 270
             |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 1246 atccctgctgatagcactacattcaagtatcttgaggataagacatctgttccctat 1302



 Score = 89.7 bits (45), Expect = 8e-18
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgcctccaactttgagatttgtaatggatggtgaaatgcctgattatttgcttgcaaag 60
            ||||| |||||| ||||||||||||| || || |||||||||||||||||||||||||| 
Sbjct: 1111 gtgccaccaactctgagatttgtaatagacggagaaatgcctgattatttgcttgcaaaa 1170

                             
Query: 61   gatttgattttacagat 77
            || |||||||| |||||
Sbjct: 1171 gacttgattttgcagat 1187