Jatropha Genome Database
- JcCB0550571.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0550571.10 + phase: 1 /pseudo/partial
(842 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29585.m000583 amino acid binding protein, putative 539 e-153
>29585.m000583 amino acid binding protein, putative
Length = 1263
Score = 539 bits (272), Expect = e-153
Identities = 482/552 (87%)
Strand = Plus / Plus
Query: 291 aaggccagtgttacagtagataatcatttgagcccagctcacacattgctacaaatacaa 350
||||||| |||||||||||||||| || |||| || ||||| ||||| || ||| || ||
Sbjct: 709 aaggccactgttacagtagataataatatgagtccggctcatacattacttcaattaaaa 768
Query: 351 tgcattgatcagaaaggcctattttatgacatattgagaacgtcaaaggactgcgatatc 410
|| ||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||
Sbjct: 769 tgtattgatcagaaaggcctgttttatgacatattgaggacgtcaaaggactgcaatatc 828
Query: 411 cagatagcttatggtagattctcttcaagtgtgaaagggcaccgtaatgtcgatctattt 470
| | | ||||||||||||||||| |||||| | |||||| |||| ||| | || ||||||
Sbjct: 829 cgggttgcttatggtagattctcgtcaagtttaaaagggtaccggaatatggacctattt 888
Query: 471 attcagcaatctgatgggaagaagataatagatcctaagcttcagcttacattgtgctct 530
||||| ||| ||||||||||||||||||| |||||||||| |||||||| ||||| |||
Sbjct: 889 attcaacaaactgatgggaagaagataatggatcctaagcatcagcttatgttgtgttct 948
Query: 531 cgtttaaaagcagagatgctccatccatttcgagtaattgttgtcaaccaaggcccagat 590
|||||||| ||||||||||| | |||||||||||| ||| ||| ||||| ||| ||||||
Sbjct: 949 cgtttaaaggcagagatgcttcgtccatttcgagttattattgccaaccgaggaccagat 1008
Query: 591 actgaactcttggttgctaaccctgtcgaattatgtgggaagggaagacctcgtgttttc 650
|| ||||||||||||||||||||||| || || | |||||||||| ||||||||||||||
Sbjct: 1009 acggaactcttggttgctaaccctgttgagttgtctgggaagggacgacctcgtgttttc 1068
Query: 651 tatgatgttactttggctctaaaaacattaggaatctgcattttctcggctaaaattgga 710
|||||||| |||||||||||||||||||||||||| ||||||||||||||| |||| |
Sbjct: 1069 tatgatgtcactttggctctaaaaacattaggaatatgcattttctcggctgaaatcgcg 1128
Query: 711 agacactcaactgaggatcgacaatgggaagtctacagatttcttttagatgaaaattgt 770
|||||||| ||| |||||| ||| |||||||| ||||||||||| || | |||||||||
Sbjct: 1129 agacactcgactcaggatcaacagtgggaagtatacagatttctcttgaacgaaaattgt 1188
Query: 771 gaagttccaattgccagtgctaaatccagaaaacaaatagtggacagagttagaaagaca 830
||||||||| | || |||||| || ||||||| ||||||||||| ||||||| |||||||
Sbjct: 1189 gaagttccattagcaagtgctcaagccagaaagcaaatagtggatagagttaaaaagaca 1248
Query: 831 ctgatgggctgg 842
|| |||||||||
Sbjct: 1249 ctaatgggctgg 1260
Score = 153 bits (77), Expect = 2e-36
Identities = 140/161 (86%)
Strand = Plus / Plus
Query: 87 cttttactcactgaaaaaaggcgagttgacacttgtagacatctgtttgctgttttcaaa 146
||||||| ||| |||||||||||| |||||| || || |||||| | |||||||||||
Sbjct: 487 cttttacacacagaaaaaaggcgaagtgacacgtgcaggcatctggcttctgttttcaaa 546
Query: 147 gagtattgtatcagttgtgaacttcaattggcagggcctgaatatgaaagtctccagaat 206
|| | ||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |
Sbjct: 547 gaatgttgtatcagctgtgaacttcaactggcaggacctgaatatgaaagtctccaggct 606
Query: 207 ttctcttccctcccattgacaattgcagaggaattgtttag 247
|||||||||||||| || |||||||||||||||| |||||
Sbjct: 607 ttctcttccctccctctgccaattgcagaggaattatttag 647