Jatropha Genome Database
- JcCB0550111.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0550111.10 + phase: 0 /partial
(1435 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29739.m003745 cation:cation antiporter, putative 567 e-161
27789.m000069 cation:cation antiporter, putative 196 3e-49
>29739.m003745 cation:cation antiporter, putative
Length = 2007
Score = 567 bits (286), Expect = e-161
Identities = 1122/1401 (80%), Gaps = 6/1401 (0%)
Strand = Plus / Plus
Query: 35 tggggaatactgctgccgattacttttgttgttctttggagaagttatcaaatttgctga 94
|||| |||||||||||||||||||| |||||||| || ||||||||||||||| | || |
Sbjct: 401 tgggaaatactgctgccgattacttctgttgttccttagagaagttatcaaatcttctca 460
Query: 95 aattgccaccagctgtcgctggtgttactttgctgccattgggaaatggggcccctgatg 154
| ||||||| |||| ||||| ||| ||||||| ||||| || ||||| || |||||||
Sbjct: 461 agctgccacctactgttgctggcgtttctttgcttccattagggaatggagctcctgatg 520
Query: 155 tgtttgctagcattgctgcttttgttggcaagaatgctggtgcagtgggtctcaatagtg 214
| |||||||| ||||||||||||||||||||| | || |||| |||||| || |||||||
Sbjct: 521 tttttgctagtattgctgcttttgttggcaaggacgcgggtgaagtggggcttaatagtg 580
Query: 215 tcttagggggagctgtttttattacttgtattgttgtgggtgttgtttctctttgtgtag 274
| || || ||||||||||||||||||||| ||||||| |||||| | || |||| |||
Sbjct: 581 tgttgggtggagctgtttttattacttgtgttgttgttggtgttatctcgctttctgtgt 640
Query: 275 cagagaggaggattcagattgatagggcatgttttattagagatatatgcttctttatgt 334
|| | ||||||||||||||||||| | || |||| |||||||| |||||||| |||
Sbjct: 641 caaaaaggaggattcagattgataagatatcttttgttagagattcttgcttcttcctgt 700
Query: 335 ttactcttttgtcactcggtacgttgttgattgttggtaacgtgtccatcgggggtgcag 394
| || | |||||| || | | ||||||||||| ||||| | | || ||||||
Sbjct: 701 tcaccatcgggtcacttggcatagttttgattgttggaaacgtcactgttggtggtgcaa 760
Query: 395 tggcatttgtctctatctatgtcatttatgcatctgcagttgctgcaaatgagattttta 454
| |||||||| || || ||| | ||||||||| ||| |||||||| || |||||| | |
Sbjct: 761 ttgcatttgtttcaatttatttagtttatgcatttgctgttgctgccaacgagattctga 820
Query: 455 ggaaacatgcttggagattgagattgaatgctataaagccattgcttcctgtgaaaggaa 514
| ||| || |||||| |||||||| ||||| ||| |||||||||||||| | | |
Sbjct: 821 gaaaatatacttggaccttgagattagatgctgtaacaccattgcttcctgttactgaa- 879
Query: 515 gtattttttctcatgaaagtgaagaggatgactctgtcaatgcctcactgctcgagtctg 574
|||||| |||||| | | || ||||| |||| ||||| || ||||||||||||
Sbjct: 880 -----ttttctaatgaaaataacgaagatgaatctgcttatgccccattgctcgagtctg 934
Query: 575 actctaaaggtgatgtgccacatctccaaaataaactcccccattggatgtgggcctcaa 634
|||| ||| |||||||||| | ||||||| ||| || || |||||||||||| | |||
Sbjct: 935 actcaaaaagtgatgtgcccctactccaaagtaagcttccacattggatgtggacttcac 994
Query: 635 atgtggcaatttattcagatgaggtcatgaaggagagtccagatgatccaaaagacgtgt 694
| ||||| ||||||||| |||| || ||||||||||||||| ||||| || ||
Sbjct: 995 aagtggcgatttattcaaatgaagtttccaaggagagtccagatagcccaaataaccagt 1054
Query: 695 ggggttggaatgaggaggaaacagtgaatggctggtgttcttgctccttttctaaattgt 754
|||||||||||||||||||||||||||| ||| | | | |||| || |||||||
Sbjct: 1055 ggggttggaatgaggaggaaacagtgaaaggcaactctctgaggtcctgtttgaaattgt 1114
Query: 755 tttccttgctggagatgccattgacactcctgagaagattgacaattcctatagtggagg 814
||| | | ||||| |||||||||||| | ||||||||| |||||||||||||| | ||||
Sbjct: 1115 tttaccttctggaaatgccattgacaattctgagaagactgacaattcctataattgagg 1174
Query: 815 aggaacgatggtcaaaaggttatgctgtcgccagtgcaacattagcacccatacttctgg 874
|||| |||||||||||||| ||||| || | ||||| ||||| ||||| || |||||||
Sbjct: 1175 aggagcgatggtcaaaaggatatgcagttggaagtgccacattggcaccaattcttctgg 1234
Query: 875 cgcttttatggaacaccaaagataatgttagcatattgaatcgagaaatttcatattttc 934
| || || ||||| || ||| |||||| | ||| ||||||||||||||||||| |
Sbjct: 1235 cactgttgtggaatactcgagaaaatgttggtatactgaatcgagaaatttcatacctcg 1294
Query: 935 ttggtgttgcttccggttgtgtttttggtgttcttgcatatctctataccaaagctgatg 994
|||||||||||| ||| |||| |||| |||||||||||| | || |||| ||| |||
Sbjct: 1295 ttggtgttgcttgtggtggtgtccttggcgttcttgcatatttttacaccagtgctaatg 1354
Query: 995 agccaccccgcaaatttatatttccatgggttctggggggattttttatgagtattatct 1054
| || || || || ||| |||||||||||||| | || || || |||||||| ||||| |
Sbjct: 1355 acccgcctcggaagtttctatttccatgggtttttggtgggttctttatgagcattattt 1414
Query: 1055 ggttctacattgtagctaatgaactcgtcgctttgctcgtggcatatggtgtaatatttg 1114
|||||||||| | || ||||| || || |||||||| || | || |||||||||||||
Sbjct: 1415 ggttctacatgattgcaaatgagcttgttgctttgcttgtaggattaggtgtaatatttg 1474
Query: 1115 gaattaatccatcactccttggattaactgtgttggcatggggaaactcaatgggtgatc 1174
|||| || ||||| ||||||| ||||| || ||||| |||||||| ||||||||||||
Sbjct: 1475 gaatcaacccatcgctccttgctttaacagtattggcgtggggaaattcaatgggtgatt 1534
Query: 1175 tgatgtcaaatgttgcattagcaacgaatggtggggacagcttgcaaattgcaatgtctg 1234
||||||||||| ||||||| || | | ||||||| || || |||| ||||| ||||| |
Sbjct: 1535 tgatgtcaaatattgcattggcgatgcatggtggcgatagtgtgcagattgccatgtcag 1594
Query: 1235 ggtgctatgcggggcccatgttcaacacacttgttggattgggactctcaatgctgcttg 1294
|||||||||| || || ||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 1595 ggtgctatgctggccctatgttcaacacgcttgttgggctgggactctcaatgctgcttg 1654
Query: 1295 gagcctggtctgatagacctagaccttacaaagttcctgaagatagcagtttgttttata 1354
||||||||||| || ||| | | || | ||| |||||||||| |||||||||||||
Sbjct: 1655 gagcctggtctagtaaacccgaatcgtatatagtacctgaagataatagtttgttttata 1714
Query: 1355 caatgggatttcttatgttgggccttatttggtcccttgttgtgttgccaaggaatgaca 1414
|||||||||||||| | | |||||| ||||||| || | ||||| ||| ||||||| |
Sbjct: 1715 caatgggatttcttgtatcaggccttgtttggtcactcatagtgttaccacggaatgata 1774
Query: 1415 tgcgccctaacaagatattag 1435
|||||||||||||||| ||||
Sbjct: 1775 tgcgccctaacaagatgttag 1795
>27789.m000069 cation:cation antiporter, putative
Length = 1851
Score = 196 bits (99), Expect = 3e-49
Identities = 282/343 (82%)
Strand = Plus / Plus
Query: 1030 gggggattttttatgagtattatctggttctacattgtagctaatgaactcgtcgctttg 1089
||||||||||||||||||||| | ||||||||||| |||||||||| || || |||||
Sbjct: 1447 gggggattttttatgagtattgtgtggttctacatgatagctaatgagcttgtagcttta 1506
Query: 1090 ctcgtggcatatggtgtaatatttggaattaatccatcactccttggattaactgtgttg 1149
| ||||||| |||| | ||||||| |||||||||||| |||||||||||||||| ||
Sbjct: 1507 ttggtggcatttggtttggtatttgggattaatccatcaatccttggattaactgtatta 1566
Query: 1150 gcatggggaaactcaatgggtgatctgatgtcaaatgttgcattagcaacgaatggtggg 1209
|||||||| ||||||||||||||||| ||||||||||||| || |||| |||||| ||
Sbjct: 1567 gcatggggcaactcaatgggtgatctagtgtcaaatgttgcgttggcaatgaatggcggt 1626
Query: 1210 gacagcttgcaaattgcaatgtctgggtgctatgcggggcccatgttcaacacacttgtt 1269
|| || |||||||||| | ||||| || ||||| || ||||||||||||||||| |
Sbjct: 1627 gatagtgtgcaaattgccttctctggatgttatgcaggtcccatgttcaacacactcatc 1686
Query: 1270 ggattgggactctcaatgctgcttggagcctggtctgatagacctagaccttacaaagtt 1329
|| ||||| | |||||||| || ||||| |||||||| || || | |||| |||
Sbjct: 1687 ggcttgggggtatcaatgcttctaggagcttggtctgagagcactggtgtatacatggtt 1746
Query: 1330 cctgaagatagcagtttgttttatacaatgggatttcttatgt 1372
||||||||||| || |||||||| || ||||||||||| ||||
Sbjct: 1747 cctgaagatagtagcttgttttacactatgggatttctcatgt 1789
Score = 81.8 bits (41), Expect = 1e-14
Identities = 182/229 (79%)
Strand = Plus / Plus
Query: 23 tgttttatcttttggggaatactgctgccgattacttttgttgttctttggagaagttat 82
|||||||| | |||||||||||||| || || |||||||||||||| ||||||||||| |
Sbjct: 434 tgttttatttgttggggaatactgcagcagactacttttgttgttcattggagaagttgt 493
Query: 83 caaatttgctgaaattgccaccagctgtcgctggtgttactttgctgccattgggaaatg 142
| | | | ||| ||||| || |||| ||||||||| || | || || | || ||||
Sbjct: 494 ctagtcttttgaggttgcctcctactgttgctggtgttgctctccttccccttgggaatg 553
Query: 143 gggcccctgatgtgtttgctagcattgctgcttttgttggcaagaatgctggtgcagtgg 202
| || || ||||||||||| || |||||||||||||| || || |||| || | || |
Sbjct: 554 gagcgccagatgtgtttgcaagtattgctgcttttgtgggtaaagatgcaggggatgttg 613
Query: 203 gtctcaatagtgtcttagggggagctgtttttattacttgtattgttgt 251
|||| || ||||| || || || ||||||||| ||||||||||||||||
Sbjct: 614 gtcttaacagtgtgttgggcggtgctgtttttgttacttgtattgttgt 662