Jatropha Genome Database

JcCB0549071.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0549071.10 + phase: 2 /partial
         (559 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28176.m000270 acyl-CoA dehydrogenase, putative                        519   e-147

>28176.m000270 acyl-CoA dehydrogenase, putative
          Length = 1323

 Score =  519 bits (262), Expect = e-147
 Identities = 436/494 (88%)
 Strand = Plus / Plus

                                                                       
Query: 11  aaagtaagagaatgtatggaaaaggaagtagctcctataatggcagagtactgggagaag 70
           ||||||||| ||||||||||||||||| | || ||||||||| ||||||| |||||||||
Sbjct: 196 aaagtaagacaatgtatggaaaaggaaatcgcacctataatgacagagtattgggagaag 255

                                                                       
Query: 71  gcaagttttccctttcatgttattcccaagcttggttccctgcgcattgctggtggcaca 130
           ||||  ||||| |||||||||||||||||||| ||| |||| ||||||||||||||||||
Sbjct: 256 gcaaagtttccgtttcatgttattcccaagctcggtacccttcgcattgctggtggcaca 315

                                                                       
Query: 131 atcaagggttacggttgtcctggtatgtcgctcgctggaagtgctattgctacagcagaa 190
           || |||||||| || ||||| ||  | || ||  ||||||||||| ||||||| ||||||
Sbjct: 316 attaagggttatgggtgtccgggcctctccctaactggaagtgctgttgctactgcagaa 375

                                                                       
Query: 191 gttgctagagttgatgcgagctgttctaccttcattttggtgcattcatctctggcaatg 250
           || || ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 376 gtcgccagagttgatgcaagctgttctacgttcattttggtgcattcatctctggcaatg 435

                                                                       
Query: 251 ctcaccatagcactttgtggatcagaggtccaaaagcagaaatatttaccttctctggct 310
           || || |||||||||||||| |||||||  || ||||||||||||||||||||| |||||
Sbjct: 436 cttacaatagcactttgtgggtcagaggcacagaagcagaaatatttaccttctttggct 495

                                                                       
Query: 311 cagttaagtactatagcttgttgggctttgactgagcctgactatggaagtgatgcaagc 370
           |||||||| ||  |||||||||||||||||||||| ||||| ||||||||||||||||| 
Sbjct: 496 cagttaagcaccgtagcttgttgggctttgactgaacctgaatatggaagtgatgcaagt 555

                                                                       
Query: 371 gccttgaaaactacagcgaacaaggtggaaggaggttgggtacttgaaggccaaaagcgc 430
           ||  | |||||||||||||  ||||||||||| |||||| |||| || ||||||||||||
Sbjct: 556 gctctaaaaactacagcgagaaaggtggaagggggttggatactggatggccaaaagcgc 615

                                                                       
Query: 431 tggataggaaacagtacctttgcagatttgttggttatatttgctaggaatacctcaaca 490
           ||||||||||||||||||||||||||| | |||||| |||||||| | ||||| ||||||
Sbjct: 616 tggataggaaacagtacctttgcagatgttttggttgtatttgctcgtaatacttcaaca 675

                         
Query: 491 aatcagatcaatgg 504
            | |||||||||||
Sbjct: 676 gagcagatcaatgg 689