Jatropha Genome Database
- JcCB0548251.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0548251.10 + phase: 1 /pseudo/partial
(688 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29647.m002022 TRANSPORT INHIBITOR RESPONSE 1 protein, putative 674 0.0
>29647.m002022 TRANSPORT INHIBITOR RESPONSE 1 protein, putative
Length = 1758
Score = 674 bits (340), Expect = 0.0
Identities = 568/644 (88%)
Strand = Plus / Plus
Query: 3 tctgaggtgagtttctcggccttggagcgtctggtgggtcggtgccccaatctgaggact 62
||||||||||||||||| ||| || |||| |||||||| |||||||||||||||||||||
Sbjct: 586 tctgaggtgagtttctcagccctgaagcgcctggtgggccggtgccccaatctgaggact 645
Query: 63 cttcggctcaaccgtaccgtgcctcttgacaggcttgcaaacatactttctagggcaccc 122
|| |||||||||||| | ||||| |||||||||||||| || |||||| ||||||||
Sbjct: 646 ctccggctcaaccgtgctgtgccccttgacaggcttgctaatatacttcgccgggcaccc 705
Query: 123 cagctagttgagttgggcacaggaacctactcatctgagctgcggcctgatgtcttctca 182
||||| ||||||||||| ||||| |||||||| | ||||||||||||||||||||||||
Sbjct: 706 cagctggttgagttgggtacaggtgcctactcagcagagctgcggcctgatgtcttctca 765
Query: 183 agcctatctggagctttttctgggtgcaaggaattgaaaagtttatctggattttgggat 242
| ||||| |||||||| |||||||||||||| |||||||||||||||| |||||||||
Sbjct: 766 actctatccggagctttctctgggtgcaaggagctgaaaagtttatctgggttttgggat 825
Query: 243 gtggttccaggttaccttccagcaatttatcctatttgctctggcctaacatcgttgaac 302
||||| |||||||||||||||||||||||||| || ||||||||||||||||| ||||||
Sbjct: 826 gtggtcccaggttaccttccagcaatttatcccatctgctctggcctaacatcattgaac 885
Query: 303 ttgagctatgctactatccaaagccctgatgtcattaaacttgtcagtcaatgtcagagt 362
||||||||||| |||||||||||||||||| | |||| || || |||||||||||||||
Sbjct: 886 ttgagctatgccactatccaaagccctgatcttgttaagctcgttagtcaatgtcagagt 945
Query: 363 ttgcagcggttgtgggtgctggattacatcgaagatattggacttgaagctcttgcaaca 422
|||||||| ||||||| |||||||||| |||||| |||| ||||||||||||||||||
Sbjct: 946 ttgcagcgcctgtgggtattggattacattgaagatgttggccttgaagctcttgcaaca 1005
Query: 423 ttttgcaaggacctgcgagaattgagggttttcccatctgagccatttgctgtggaacca 482
|||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||
Sbjct: 1006 ttttgcaaggacctgcgagaattgagggtttttccatctgatccatttggcccagaacca 1065
Query: 483 aatgtatccttgacagagcagggccttgtctctgtttctgagggttgccctaaactccaa 542
|||||||||||||| || ||||| ||||| |||||| ||||| |||||||| || ||
Sbjct: 1066 aatgtatccttgacggaacagggtcttgttgttgtttcagagggctgccctaagcttcag 1125
Query: 543 tctgttctgtacttttgccatcaaatgaccaatgatgccttgataacagttgctaggaat 602
|| |||||||||||||||| ||| ||||| |||||||||||||||||| |||| |||||
Sbjct: 1126 tccgttctgtacttttgccgtcagatgactaatgatgccttgataacaattgccaggaac 1185
Query: 603 cgtcccaacatgactcgctttcggctttgtattatggaaccacg 646
||||| |||||||| || ||||| ||||||||||| ||||||||
Sbjct: 1186 cgtccaaacatgacacgttttcgtctttgtattattgaaccacg 1229