Jatropha Genome Database

JcCB0545911.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0545911.10 - phase: 0 /partial
         (306 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30115.m001181 conserved hypothetical protein                          133   7e-31

>30115.m001181 conserved hypothetical protein
          Length = 660

 Score =  133 bits (67), Expect = 7e-31
 Identities = 242/300 (80%), Gaps = 9/300 (3%)
 Strand = Plus / Plus

                                                                       
Query: 16  gaagtagaaacgtcagtttattatagctgtagagaaaggagagagaccacgccatcgagc 75
           ||||| |||||||| || || ||||||||||||||||| ||||| | |||||||||||| 
Sbjct: 358 gaagttgaaacgtctgtgtactatagctgtagagaaagaagagaaagcacgccatcgagt 417

                                                                       
Query: 76  cagcttcgacctgaatcatcagacgaactggattccatagctagaccatcacc---ggag 132
            || || ||   |||| |||||||||||||||||| |  || ||||||||| |   ||||
Sbjct: 418 gaggttggagaagaattatcagacgaactggattctacggcaagaccatcagcaatggag 477

                                                                       
Query: 133 gcaaatactctccgcagatca------acggccgagaagatgccaacggagtctgagctt 186
           |||||| | | ||| | | ||      ||||  |||||||||||||||||| ||||||| 
Sbjct: 478 gcaaattcacgccgtaaaccatcattaacggtggagaagatgccaacggagactgagctc 537

                                                                       
Query: 187 gacgaattcttcacagaagccgagaaaagtatccaaaaacaatttgcagaaaagtataac 246
           || ||||||||  ||||||| || |  | ||| ||||||| ||||||||| |||||||||
Sbjct: 538 gatgaattctttgcagaagctgaaaggaatattcaaaaacgatttgcagacaagtataac 597

                                                                       
Query: 247 tacgatattgtcaaggacgagcccttggaaggacggtacgagtgggtgcgattaaagcca 306
           |||||| | || ||||| || || ||| |||||||||||||||||||| |||||||||||
Sbjct: 598 tacgatgtcgtgaaggatgaaccattgaaaggacggtacgagtgggtgagattaaagcca 657