Jatropha Genome Database
- JcCB0545221.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0545221.10 + phase: 1 /partial
(875 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29794.m003359 conserved hypothetical protein 167 1e-40
30146.m003441 hypothetical protein 58 9e-08
>29794.m003359 conserved hypothetical protein
Length = 2163
Score = 167 bits (84), Expect = 1e-40
Identities = 296/367 (80%), Gaps = 6/367 (1%)
Strand = Plus / Plus
Query: 4 atcccgagaaaccaaaccataagatggaatgttctgcagagaatgcaattgggaagacat 63
|||| ||||||| ||| || || ||||||| |||||| ||||||||| ||||||||
Sbjct: 1310 atcctgagaaactaaatcacaacatggaatattctgccgagaatgcagttgggaag---- 1365
Query: 64 cattttcttctgcgaaaaatggtagtcaaccttctaataatggttcttatttagggaatc 123
|||||||||| |||||||| ||||| ||||||||| || ||||| |||||| |
Sbjct: 1366 --ttttcttctgtcaaaaatggcagtcagccttctaattgcgggccttatacagggaacc 1423
Query: 124 ccccacctgttcctgtacctactgattccaaaatgagtccttggtgtttccaacattcac 183
| ||| |||||||| || ||||| ||||||| |||||||||||||| |||||||
Sbjct: 1424 caaaaccagttcctgtggctgctgatagcaaaatggccccttggtgtttccagcattcac 1483
Query: 184 ttggacatcagtggctagttcctgtaatgtcgccttcagaaggacttgtatacaagccat 243
| || ||||||||| |||||||||| ||||| || |||||||||||||||||||||||||
Sbjct: 1484 tcgggcatcagtggttagttcctgtgatgtctccgtcagaaggacttgtatacaagccat 1543
Query: 244 acaatgcaccaggattcttgggatcagcctgtggaggatgcggaccttttggcgcatctc 303
|| ||||||||||| ||||||||| ||||||||||||| | |||||||| || ||
Sbjct: 1544 acgccgcaccaggatttatgggatcagtctgtggaggatgcaggccttttggtccaagtc 1603
Query: 304 ccatggtcggtaactttattaatccaacctatgggattccaccttcttctcatcaccatc 363
| || ||||| ||||| |||| ||||||||| ||||| ||||| ||||| |||||
Sbjct: 1604 ctgtgactggtaattttatggatccgacctatggggttccagcttctcatcatccccatc 1663
Query: 364 aaggaac 370
|||||||
Sbjct: 1664 aaggaac 1670
Score = 117 bits (59), Expect = 1e-25
Identities = 212/263 (80%)
Strand = Plus / Plus
Query: 600 cgggcatctaaagacactgaactacggggaagtacagctagtagccctggggagagagtg 659
||||| |||||||||||||| ||||||||||||||||| || || || | |||||||||
Sbjct: 1885 cgggcttctaaagacactgagctacggggaagtacagcaagcagtcccagtgagagagtg 1944
Query: 660 caaggagttgggactgttgaggctgctgaaggaagagatgcactgctgctgttcccagta 719
||||||| ||||| || | | ||||||||| ||||||| |||| | |||||||||
Sbjct: 1945 caaggagctgggaatgctcaagctgctgaaacaagagatccacttccactgttcccaacg 2004
Query: 720 gctcctgctacaccagaaggagcctctcagcctcaagagactgacatgccgacaagagtg 779
|||||| | | ||||||||| ||||||||||| || || ||| | | |||||
Sbjct: 2005 gctcctattgctttggaaggagccactcagcctcaacttaccaaccagccaagaggagtg 2064
Query: 780 atcaaagtcgtgcctcacaacccaagatctgctactgaatcagcagcacgaattttcaaa 839
|||||||| ||||||||||||| |||||||||||||| |||||||| || |||||| ||
Sbjct: 2065 atcaaagttgtgcctcacaaccgtagatctgctactgagtcagcagctcggattttccaa 2124
Query: 840 tctatacaggcagaaagaaaaca 862
||||| || | ||| ||||||||
Sbjct: 2125 tctatccaagaagagagaaaaca 2147
>30146.m003441 hypothetical protein
Length = 2352
Score = 58.0 bits (29), Expect = 9e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 190 atcagtggctagttcctgtaatgtcgccttcagaaggacttgtatacaagccataca 246
|||||||| ||||||| |||||||| ||||| || || ||||| |||||||||||||
Sbjct: 1682 atcagtggttagttccagtaatgtccccttctgagggtcttgtttacaagccataca 1738