Jatropha Genome Database
- JcCB0544731.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0544731.10 - phase: 2 /pseudo/partial
(706 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29772.m000318 cysteine desulfurylase, putative 188 3e-47
30136.m001038 cysteine desulfurylase, putative 145 4e-34
>29772.m000318 cysteine desulfurylase, putative
Length = 1797
Score = 188 bits (95), Expect = 3e-47
Identities = 268/325 (82%), Gaps = 2/325 (0%)
Strand = Plus / Plus
Query: 183 atcttaacatgtgggcagagacaga-aacaaaagagataagcctttacatggagcttttg 241
||||| |||||||||| ||||||| ||||| |||||||||||| | |||||||| ||||
Sbjct: 1226 atctttacatgtgggctgagacagggaacaagagagataagcctcttcatggagcatttg 1285
Query: 242 ttgctgctttgcttaatgacttgtttggaattcagtctagaggtgggagtgcctgtgctg 301
|||| ||||||||||||||||||||||| || |||||||||||||| |||| |||||||
Sbjct: 1286 ttgcagctttgcttaatgacttgtttggtatccagtctagaggtggatgtgcttgtgctg 1345
Query: 302 gtccttatggtcannnnnnngctcaacatcaatcagactacctctcttgcaattagatca 361
| ||||||||||| ||| || |||| | ||||| || ||||| | || ||
Sbjct: 1346 gaccttatggtca-tcttttgcttaatatcagtgagactgtttcccttgctttaaggtct 1404
Query: 362 gcaatacaaaaggggtatgttggagtaaagccaggatggacaaggattagtttcccatat 421
|| ||||| |||| ||| | ||||||||||||||||||||||| ||||| || || ||
Sbjct: 1405 gctatacaccagggatatatgggagtaaagccaggatggacaagaattagctttccctac 1464
Query: 422 tacatgtctgaagaggaatttgagttcattcttgcagcagttgaatttatagccatttac 481
|||||||| | || ||||||||||| ||| |||||||||| ||||||||||| ||||||
Sbjct: 1465 tacatgtcaaatgaagaatttgagtttattattgcagcagtggaatttatagctatttac 1524
Query: 482 ggccaacgatttcttccattatatc 506
|||||||| ||||| ||||| ||||
Sbjct: 1525 ggccaacgttttctaccattgtatc 1549
>30136.m001038 cysteine desulfurylase, putative
Length = 1902
Score = 145 bits (73), Expect = 4e-34
Identities = 284/355 (80%), Gaps = 1/355 (0%)
Strand = Plus / Plus
Query: 208 aacaaaagagataagcctttacatggagcttttgttgctgctttgcttaatgacttgttt 267
||||| |||||||||||| | |||||||| |||||||| |||||||||||||||||||
Sbjct: 1366 aacaagagagataagcctcttcatggagcatttgttgcaagtttgcttaatgacttgttt 1425
Query: 268 ggaattcagtctagaggtgggagtgcctgtgctggtccttatggtcannnnnnngctcaa 327
|| || || ||||||||||| |||| |||||||| ||||||||||| ||| |
Sbjct: 1426 ggtatccaatctagaggtggatgtgcttgtgctggaccttatggtcatgtttt-gcttga 1484
Query: 328 catcaatcagactacctctcttgcaattagatcagcaatacaaaaggggtatgttggagt 387
|||| | || ||| ||| ||||| | ||||| || ||||| |||| || | ||||
Sbjct: 1485 tatcagtgaggctaactcccttgctttaagatctgccatacaccagggatacatgggagc 1544
Query: 388 aaagccaggatggacaaggattagtttcccatattacatgtctgaagaggaatttgagtt 447
|||||||||||||||||| ||||| || ||||| |||||||| | | |||||||| ||
Sbjct: 1545 aaagccaggatggacaagaattagctttccatactacatgtccaaccaagaatttgaatt 1604
Query: 448 cattcttgcagcagttgaatttatagccatttacggccaacgatttcttccattatatca 507
|| | |||||||| |||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 1605 tataatggcagcagtggaatttgtagccatttacggccaacgttttctaccattgtatgg 1664
Query: 508 tttcaattggaaaaatggcaactggactttcaagaaaaaggcatttaaggacttg 562
||||||| |||| ||| | ||| ||||||||||||||||||||||||||||
Sbjct: 1665 cttcaattttaaaactggaacttggtatttcaagaaaaaggcatttaaggacttg 1719
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 105 agacaagctatattctccttcctcatatattctac 139
|||||||||||||| || |||||||||||||||||
Sbjct: 1273 agacaagctatattatcattcctcatatattctac 1307