Jatropha Genome Database
- JcCB0543811.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0543811.10 + phase: 0 /partial
(444 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30189.m001676 Succinyl-CoA ligase [GDP-forming] subunit alpha-2,... 438 e-122
30189.m001675 Succinyl-CoA ligase [GDP-forming] subunit alpha-2,... 436 e-122
>30189.m001676 Succinyl-CoA ligase [GDP-forming] subunit alpha-2,
mitochondrial precursor, putative
Length = 1005
Score = 438 bits (221), Expect = e-122
Identities = 341/381 (89%)
Strand = Plus / Plus
Query: 45 ggtggggggcgtaacaccaaagaagggaggaacagaacacttgggcctccctgtttttaa 104
|||||| || ||||||||||||||||||||||||||||||||||| || |||||||| ||
Sbjct: 216 ggtgggcggagtaacaccaaagaagggaggaacagaacacttggggcttcctgttttcaa 275
Query: 105 tacagttgcagaagcaaaggctgaaacaaaagctaatgcttcagtcatttatgttccccc 164
|||||||| ||||| || |||||||| |||||||||||||| ||||||||||| || ||
Sbjct: 276 cacagttgctgaagctaaagctgaaactaaagctaatgcttctgtcatttatgtgcctcc 335
Query: 165 accatttgcagcagcagcaattatggaggcaatggaagcggagttagatcttgttgtgtg 224
|| ||||| || || || || |||||||| |||||||| || || ||||||||||| ||
Sbjct: 336 gccttttgctgctgcggctatcatggaggctatggaagctgaattggatcttgttgtttg 395
Query: 225 cattacagagggaattcctcaacatgatatggtacgtgtgaaggctgctcttaataaaca 284
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 396 cattactgagggaattcctcaacatgatatggtacgtgtgaaggctgctcttaacagaca 455
Query: 285 gtccaaaactcggttgattggtccaaactgccctggtatcattaaacctggggaatgtaa 344
|| ||||||||||||||||| || ||||||||||| || || || || || ||||||||
Sbjct: 456 atctaaaactcggttgattgggccgaactgccctggaattatcaagccaggagaatgtaa 515
Query: 345 gattggcataatgcctgggtacatacataaacctggtcgcattggaatagtttctcgatc 404
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 516 gattggcataatgcctggttacatccataaacctggtcgcattggaatagtttctcgatc 575
Query: 405 tggtactttgacctatgaagc 425
|||||||||||||||||||||
Sbjct: 576 tggtactttgacctatgaagc 596
>30189.m001675 Succinyl-CoA ligase [GDP-forming] subunit alpha-2,
mitochondrial precursor, putative
Length = 1005
Score = 436 bits (220), Expect = e-122
Identities = 343/384 (89%)
Strand = Plus / Plus
Query: 45 ggtggggggcgtaacaccaaagaagggaggaacagaacacttgggcctccctgtttttaa 104
|||||| || ||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 216 ggtgggcggagtaacaccaaagaagggaggaacagaacacttgggacttcctgtttttaa 275
Query: 105 tacagttgcagaagcaaaggctgaaacaaaagctaatgcttcagtcatttatgttccccc 164
|||||||| ||||| || |||||||| |||||||||||||| |||||||| || |||||
Sbjct: 276 cacagttgctgaagccaaagctgaaactaaagctaatgcttctgtcatttacgtgccccc 335
Query: 165 accatttgcagcagcagcaattatggaggcaatggaagcggagttagatcttgttgtgtg 224
|| ||||| || || || || |||||||| |||||||| || || ||||||||||| ||
Sbjct: 336 gccttttgctgctgcggctatcatggaggctatggaagctgaattggatcttgttgtttg 395
Query: 225 cattacagagggaattcctcaacatgatatggtacgtgtgaaggctgctcttaataaaca 284
|||||| |||||||||||||||||||| |||||||||||||||||||||||||| | |||
Sbjct: 396 cattactgagggaattcctcaacatgacatggtacgtgtgaaggctgctcttaacagaca 455
Query: 285 gtccaaaactcggttgattggtccaaactgccctggtatcattaaacctggggaatgtaa 344
|| ||||||||||||||||| || |||||||| || || || || || || ||||||||
Sbjct: 456 atctaaaactcggttgattgggccgaactgccccggaattatcaagccaggagaatgtaa 515
Query: 345 gattggcataatgcctgggtacatacataaacctggtcgcattggaatagtttctcgatc 404
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 516 gattggcataatgcctgggtacatccataaacctggtcgcattggaatagtttcgcgatc 575
Query: 405 tggtactttgacctatgaagcggt 428
||||||||||||||||||||||||
Sbjct: 576 tggtactttgacctatgaagcggt 599