Jatropha Genome Database
- JcCB0543221.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0543221.10 - phase: 2 /partial
(449 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29729.m002354 superoxide dismutase [mn], putative 456 e-128
29729.m002353 superoxide dismutase [mn], putative 268 3e-71
>29729.m002354 superoxide dismutase [mn], putative
Length = 705
Score = 456 bits (230), Expect = e-128
Identities = 356/398 (89%)
Strand = Plus / Plus
Query: 47 gctcttgagcccgtgattagtgccgagataatgcagcttcatcaccaaaagcaccaccag 106
||||||||||| || ||||| | ||||||||||||||||||||||||||| || ||||||
Sbjct: 127 gctcttgagcctgttattagcggcgagataatgcagcttcatcaccaaaaacatcaccag 186
Query: 107 acttatattactaactataataagtctcttgagctgctcaatgaagctatgaataagggg 166
||||||||||| || |||||||||||||||||||| || |||||||||||| | |||||
Sbjct: 187 acttatattaccaattataataagtctcttgagcttcttaatgaagctatggaaaagggc 246
Query: 167 gactctgcttctgttgtcaagttgcagagcgccatcaagttcaatggtggaggtcatatc 226
|||||| |||||||||| |||||||||||||| ||||| ||||| || ||||||||||||
Sbjct: 247 gactcttcttctgttgttaagttgcagagcgctatcaaattcaacggaggaggtcatatc 306
Query: 227 aaccactccattttctggaagaatctcgcccctgttcgtgaaggaggtggtgaacctccg 286
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||
Sbjct: 307 aaccactccattttctggaacaatcttgcccctgttcgtgaaggaggtggtgaaccccca 366
Query: 287 catggttcccttggttgggcgattgatgaagattttggttctttggaaaagttgatccag 346
|| ||||||||||||||||| || || |||||||||||||||||| |||||||| |||
Sbjct: 367 cacggttcccttggttgggccatcgacacagattttggttctttggagaagttgatacag 426
Query: 347 aaaatcagcacagaaggtgctgctgtccaaggatctggatgggtgtggcttggtttggac 406
||||| | |||||||| |||||||||||||||||||||||||||||||||||| | |||
Sbjct: 427 aaaatgaatacagaaggcgctgctgtccaaggatctggatgggtgtggcttggtgtcgac 486
Query: 407 aaagaagcaaagaaacttgtagttgagacaactgcaaa 444
|||| | | ||||| ||||| |||||||||||||||||
Sbjct: 487 aaagcatccaagaagcttgttgttgagacaactgcaaa 524
>29729.m002353 superoxide dismutase [mn], putative
Length = 720
Score = 268 bits (135), Expect = 3e-71
Identities = 337/403 (83%), Gaps = 1/403 (0%)
Strand = Plus / Plus
Query: 47 gctcttgagcccgtgattagtgccgagataatgcagcttcatcaccaaaagcaccaccag 106
||||||||||| | ||||||| |||||||||| ||||||||||| ||||| |||| |
Sbjct: 142 gctcttgagccttttattagtggcgagataatgtttcttcatcaccagaagcatcacctg 201
Query: 107 acttatattactaactataataagtctcttgagctgctcaatgaagctatgaataagggg 166
||||| |||||||||| ||||||||||||||||| |||||| | ||||| || ||
Sbjct: 202 gcttatgttactaactacaataagtctcttgagcttctcaatcaggctatcgcaaatggt 261
Query: 167 gactctgcttctgttgtcaagttgcagagcgccatcaagttcaatggtggaggtcatatc 226
|||||| | |||||||||||| |||| || | |||||||||||||| ||||||||||||
Sbjct: 262 gactcttcctctgttgtcaagctgcaaagttctatcaagttcaatggaggaggtcatatc 321
Query: 227 aaccactccattttctggaagaatctcgcccctgttcgtgaaggaggtggtgaacctccg 286
|||||||||||||||||||||||||| || ||||| |||||||||||||| ||| ||
Sbjct: 322 aaccactccattttctggaagaatcttgcacctgtcagtgaaggaggtggtataccccca 381
Query: 287 catggttcccttggttgggcgattgatgaagattttggttctttggaaaagttgatccag 346
||||||||||||| || || ||||| ||| ||||||||| ||||||||||||| ||
Sbjct: 382 catggttcccttgcttcagctattgacacagaatttggttctctggaaaagttgatacaa 441
Query: 347 aaaatcagcacagaaggtgctgctgtccaaggatctggatgggtgtggcttggtttggac 406
|| || | |||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 442 aagatgaatgcagaaggtgctgctgtggaaggatctggatgggtgtggcttggcgtggac 501
Query: 407 aaagaagcaaagaaacttgtagttgagacaactgcaaaaccag 449
||||| | ||||| ||||| |||| ||| ||| |||||||||
Sbjct: 502 aaagactctaagaagcttgtggttgcgaccact-caaaaccag 543