Jatropha Genome Database

JcCB0539871.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0539871.10 + phase: 0 /pseudo
         (453 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29883.m002036 trehalose-6-phosphate synthase, putative                396   e-110
30147.m013978 trehalose-6-phosphate synthase, putative                 64   8e-10

>29883.m002036 trehalose-6-phosphate synthase, putative
          Length = 2586

 Score =  396 bits (200), Expect = e-110
 Identities = 397/460 (86%), Gaps = 7/460 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtttcaaggtcgtatatgaattttctagacttggcctctgggaacttgttggatatt 60
           ||||| ||||| || ||| |||||||  |||||||||||||||| ||| || ||||||||
Sbjct: 1   atggtctcaagatcatatgtgaatttcttagacttggcctctggaaacctgctggatatt 60

                                                                       
Query: 61  cctcagactccaaggtctcttcctagagtgatgactgttcctggaattatctctgatgcg 120
           ||||  |||||||| ||| |||||||||| |||||||| || |||||||||||||||  |
Sbjct: 61  cctccaactccaagatctattcctagagtcatgactgtaccaggaattatctctgatttg 120

                                                                       
Query: 121 gatggttatggctgtaatgatggtgattcagaagttagttcatctattt---gtgagcgg 177
           ||||||||| || |||||||||| |||||||| || || ||||||||||   ||||||||
Sbjct: 121 gatggttattgcagtaatgatggggattcagaggtcagctcatctatttatcgtgagcgg 180

                                                                       
Query: 178 aaaattatagtggcaaatatgttacctttgcatgctaagaaggatacaaatggcaa---a 234
            ||||||||||||||||||||||||| ||||||||||| ||||||||| |   |||   |
Sbjct: 181 gaaattatagtggcaaatatgttaccattgcatgctaaaaaggatacagaaaccaacaaa 240

                                                                       
Query: 235 tggtgcttcagccgagatgaagattcacttctgttgcaactaaaggatggtttttctcct 294
           ||||||||||| || ||||||||||||||| |||| ||||| |||||||| |||||||||
Sbjct: 241 tggtgcttcagtcgggatgaagattcacttttgttacaactgaaggatggcttttctcct 300

                                                                       
Query: 295 gaaactgaggttatttatgtggggtctctgaaggctgatatagatgctagtgagcaggaa 354
           ||||||||||| ||||||||||| ||||| ||||||||||||||||  | ||||||||||
Sbjct: 301 gaaactgaggtcatttatgtgggatctcttaaggctgatatagatgtcaatgagcaggaa 360

                                                                       
Query: 355 gaagtttcccaaaaactgctggaggattttaattgtgttcctacgtttctacctcaagac 414
           ||  ||||||| ||| ||||||||||||| || ||||||||||| ||| |||| ||||||
Sbjct: 361 gagatttcccagaaattgctggaggatttcaactgtgttcctacatttttaccccaagac 420

                                                   
Query: 415 ttacagaagaagttttatcttggattctg-aaacagcagt 453
            | ||||||||||| |||||||| ||||| ||||||||||
Sbjct: 421 ctgcagaagaagttctatcttgggttctgtaaacagcagt 460


>30147.m013978 trehalose-6-phosphate synthase, putative
          Length = 2586

 Score = 63.9 bits (32), Expect = 8e-10
 Identities = 86/104 (82%)
 Strand = Plus / Plus

                                                                       
Query: 301 gaggttatttatgtggggtctctgaaggctgatatagatgctagtgagcaggaagaagtt 360
           |||||| |||||||||| ||||||||||||||| ||||| | ||||| || || ||||| 
Sbjct: 307 gaggttgtttatgtgggatctctgaaggctgatgtagatacaagtgaacaagaggaagtc 366

                                                       
Query: 361 tcccaaaaactgctggaggattttaattgtgttcctacgtttct 404
           ||||| ||  |||| || || ||||| ||||| ||||| |||||
Sbjct: 367 tcccagaagttgcttgatgaatttaactgtgtacctacctttct 410