Jatropha Genome Database

JcCB0539681.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0539681.10 + phase: 0 /partial
         (501 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30115.m001209 zeaxanthin epoxidase, putative                          464   e-130

>30115.m001209 zeaxanthin epoxidase, putative
          Length = 1998

 Score =  464 bits (234), Expect = e-130
 Identities = 381/430 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgaggaagaacttatttgggccaaaggacgccacatactcagactatacttgttatact 60
            ||||||||||||||||| ||||||||||| ||||||||||| | ||| ||||||||||||
Sbjct: 751  gtgaggaagaacttattcgggccaaaggaagccacatactccggctacacttgttatact 810

                                                                        
Query: 61   ggcattgcagattttgtgcctgcggatattgagtctgttgggtatcgagtatttttgggt 120
            ||||||||||||||||||||||  |||||||||||||||||||||||||||||| | |||
Sbjct: 811  ggcattgcagattttgtgcctgttgatattgagtctgttgggtatcgagtatttcttggt 870

                                                                        
Query: 121  cataagcagtactttgtttcttcggacgtgggtgctggaaagatgcagtggtatgcattt 180
            ||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 871  cataaacaatactttgtttcttcggatgtgggtgctggaaagatgcagtggtatgcattt 930

                                                                        
Query: 181  cacaaggaaccacccgggggtgtggataggcccaatggtaaaaaggaaaggctgttgaaa 240
            ||||| |||||||| || || |||||||| ||||| ||||||||||||||| || |||||
Sbjct: 931  cacaatgaaccacctggtggcgtggatagccccaacggtaaaaaggaaaggttgctgaaa 990

                                                                        
Query: 241  atatttgagggttggtgtgataatgtaattgatttgctgcttgcaacagacgaagacgcc 300
            ||||||||||||||||||||||||||||| ||| || |||  || ||||||||||| || 
Sbjct: 991  atatttgagggttggtgtgataatgtaatagatctgttgcacgccacagacgaagatgct 1050

                                                                        
Query: 301  attcttcgacgtgacatatatgacaggacacccacattaacatggggtaggggtcgtgtg 360
            ||||||||||||||||||||||||||   |||    || |||||||| | |||||| |||
Sbjct: 1051 attcttcgacgtgacatatatgacagagaacctgtttttacatggggaaagggtcgcgtg 1110

                                                                        
Query: 361  accttgcttggggattcagtccacgcaatgcagccaaatatgggtcaaggtggctgtatg 420
            || |||||||| |||||| | || || |||||||| |||||||||||||| || || |||
Sbjct: 1111 acattgcttggtgattcaattcatgccatgcagcctaatatgggtcaaggagggtgcatg 1170

                      
Query: 421  gccattgagg 430
            ||||||||||
Sbjct: 1171 gccattgagg 1180