Jatropha Genome Database
- JcCB0538041.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0538041.10 + phase: 0
(1308 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30174.m008860 UDP-glucuronate 5-epimerase, putative 484 e-136
30190.m011013 UDP-glucuronate 5-epimerase, putative 289 2e-77
29629.m001442 UDP-glucuronate 5-epimerase, putative 141 1e-32
29783.m000322 UDP-glucuronate 5-epimerase, putative 119 4e-26
30146.m003476 UDP-glucuronate 5-epimerase, putative 64 2e-09
>30174.m008860 UDP-glucuronate 5-epimerase, putative
Length = 459
Score = 484 bits (244), Expect = e-136
Identities = 400/452 (88%)
Strand = Plus / Plus
Query: 853 atggcttatttctttttcactagggatattttgaaagggaagagtatacccatttttgaa 912
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 atggcttatttctttttcactagggatattttgaaagggaagagtatatccatttttgaa 60
Query: 913 gcagctagtcacggaactgtcgctagggattttacctacattgatgatattgtaaagggt 972
||||||| ||| || ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcagctaatcatggtactgttgctagggattttacctacattgatgatattgtaaagggt 120
Query: 973 tgcttggctgcattggacactgccgagaagagtactggtagtggaggtaaaaagaagggt 1032
|| |||| ||| ||||| ||||| ||||||||||||||||||||||| || ||||| ||
Sbjct: 121 tgtttgggtgctttggatactgctgagaagagtactggtagtggagggaagaagaaagga 180
Query: 1033 ccagcacaattgagggttttcaatttgggaaatacctctcctgtaccggttactgatctt 1092
||||| ||||||||||||||||| ||||||||||| |||||||| || ||| | ||||||
Sbjct: 181 ccagctcaattgagggttttcaacttgggaaatacatctcctgtgcctgtttcagatctt 240
Query: 1093 gttagtattttagaaaggcttttgaaggcgaaggccaagaggaatatcatgaagttgcca 1152
|| |||||||| |||||||||||||||| || || ||||||||||| |||||| ||||
Sbjct: 241 gtcagtattttggaaaggcttttgaaggtcaaagcaaagaggaatattatgaagctgcct 300
Query: 1153 agaaatggggacgttcagtttacacatgctaatattagtttggcacagagggaacttgga 1212
|| |||||||| |||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 301 aggaatggggatgttcagtttacacatgctaatattagtttggcgcagatggaacttggg 360
Query: 1213 tataagcctagcacggatctgcaaacggggttgaagaaatttgtaagatggtacctcagc 1272
||||| || | || ||| |||| || || ||||||||||||| | |||||||| |||
Sbjct: 361 tataaacccactacagatttgcagacaggcctgaagaaatttgtgcggtggtaccttagc 420
Query: 1273 tactatcgtgtaggagggaagaaagctgatgc 1304
||||||| ||||||||| ||||| ||||||||
Sbjct: 421 tactatcatgtaggaggaaagaaggctgatgc 452
>30190.m011013 UDP-glucuronate 5-epimerase, putative
Length = 1314
Score = 289 bits (146), Expect = 2e-77
Identities = 578/722 (80%)
Strand = Plus / Plus
Query: 501 ggtgccttttactcatgtgatgcatttggctgctcaggctggggttaggtatgcaatgga 560
||||| |||||||||||| |||||||| |||||||| ||||| ||| | ||||||||| |
Sbjct: 501 ggtgcgttttactcatgtaatgcatttagctgctcaagctggtgttcgttatgcaatgca 560
Query: 561 aaaccctagctcttatgtgcacagtaacattgctggtcttgttagtttattagaagtttg 620
|| || | |||||||| | ||||| |||||||| |||||| |||| | || |||||
Sbjct: 561 gaatccaaagtcttatgtcaatagtaatattgctggctttgttaatttacttgaggtttg 620
Query: 621 taaagaagcaaatccccaacctgcaattgtatgggcatcttccagttctgtttatgggct 680
|||| |||||| || ||||||||| |||| ||||| ||||| ||||| |||||||| ||
Sbjct: 621 taaatcagcaaacccacaacctgcagttgtttgggcttcttcgagttcagtttatggact 680
Query: 681 taatacaaaagtacccttttctgagaaagatagaactgaccaacctgctagtttgtatgc 740
||| || || |||||||| ||||| ||||||||||| || ||||| ||||| |||||
Sbjct: 681 gaatttcaaggtgcccttttcagagaaggatagaactgatcagcctgcaagtttatatgc 740
Query: 741 tgctactaaaaaggctggagaggaaattgcacatacttataatcatatttacggtctttc 800
||||| || || ||||||||||||||||| ||| | |||||||||||||| ||| | ||
Sbjct: 741 agctacgaagaaagctggagaggaaattgctcattcgtataatcatatttatggtttgtc 800
Query: 801 ccttactggcttgcgctttttcacagtttatggaccatggggtagaccagatatggctta 860
||||||| || | ||||| || ||||||||||| ||||| || || || ||||| ||
Sbjct: 801 aattactggtttaaggttttttactgtttatggaccttggggaaggcctgacatggccta 860
Query: 861 tttctttttcactagggatattttgaaagggaagagtatacccatttttgaagcagctag 920
|||||||||||||| |||||||||||| |||||| || || ||| || |||||
Sbjct: 861 tttctttttcactaaggatattttgaaggggaaggagattggtatctttcaaacagctga 920
Query: 921 tcacggaactgtcgctagggattttacctacattgatgatattgtaaagggttgcttggc 980
| | | ||| || ||||||||||| ||||||||||||||||| || || || || ||
Sbjct: 921 tggaaggagtgtagcaagggattttacttacattgatgatattgtgaaaggctgtttagc 980
Query: 981 tgcattggacactgccgagaagagtactggtagtggaggtaaaaagaagggtccagcaca 1040
||| ||||| || ||| ||||||||||||| ||||| || || ||||||||| | || ||
Sbjct: 981 tgctttggataccgccaagaagagtactgggagtggtggcaagaagaagggtgccgctca 1040
Query: 1041 attgagggttttcaatttgggaaatacctctcctgtaccggttactgatcttgttagtat 1100
||| ||| |||| |||||||| ||||| || |||||||| |||| | |||||| | ||
Sbjct: 1041 attcaggctttttaatttggggaatacttcacctgtacctgttagtaggcttgttgggat 1100
Query: 1101 tttagaaaggcttttgaaggcgaaggccaagaggaatatcatgaagttgccaagaaatgg 1160
||| || || || ||||||| ||| || |||| ||| | || ||||||||||||||
Sbjct: 1101 tttggagagtctcttgaaggtgaaagctaagaagaaagtgttgccattgccaagaaatgg 1160
Query: 1161 ggacgttcagtttacacatgctaatattagtttggcacagagggaacttggatataagcc 1220
||||||| ||||||||||||| ||||||||||| || || || || |||||||||| |||
Sbjct: 1161 ggacgttgagtttacacatgccaatattagttttgcgcaaagagagcttggatataggcc 1220
Query: 1221 ta 1222
||
Sbjct: 1221 ta 1222
>29629.m001442 UDP-glucuronate 5-epimerase, putative
Length = 1206
Score = 141 bits (71), Expect = 1e-32
Identities = 215/263 (81%)
Strand = Plus / Plus
Query: 628 gcaaatccccaacctgcaattgtatgggcatcttccagttctgtttatgggcttaataca 687
||||| || |||||||||||||| ||||| || || ||||||||||||||||| || ||
Sbjct: 496 gcaaacccacaacctgcaattgtgtgggcttcgtcgagttctgtttatgggctgaacact 555
Query: 688 aaagtacccttttctgagaaagatagaactgaccaacctgctagtttgtatgctgctact 747
||||||||||||| || | |||||||| || || || || || || || || |||||
Sbjct: 556 gaagtacccttttcagaaatcgatagaacagatcagccagcaagcttatacgcagctaca 615
Query: 748 aaaaaggctggagaggaaattgcacatacttataatcatatttacggtctttcccttact 807
|| || ||||| || |||||||| || |||||||| |||||||||||||||||||| |||
Sbjct: 616 aagaaagctggtgaagaaattgcgcacacttataaccatatttacggtctttccctaact 675
Query: 808 ggcttgcgctttttcacagtttatggaccatggggtagaccagatatggcttatttcttt 867
|| || || || || ||||| || || |||||||| ||||| |||||||| ||||| ||
Sbjct: 676 gggttacgattctttacagtgtacggtccatggggaagacccgatatggcatattttttc 735
Query: 868 ttcactagggatattttgaaagg 890
||||||| |||||| ||| ||||
Sbjct: 736 ttcactaaggatatcttgcaagg 758
Score = 67.9 bits (34), Expect = 1e-10
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 985 ttggacactgccgagaagagtactggtagtggaggtaaaaagaagggtccagcacaattg 1044
|||||||| || ||||||||||| || ||||| || |||||||| |||||||| ||| ||
Sbjct: 853 ttggacacggcggagaagagtacaggaagtggtggaaaaaagaaaggtccagctcaactg 912
Query: 1045 agggttttcaatttgggaaatacctc 1070
||||| | |||| | |||||||||||
Sbjct: 913 agggtgtacaatcttggaaatacctc 938
>29783.m000322 UDP-glucuronate 5-epimerase, putative
Length = 1302
Score = 119 bits (60), Expect = 4e-26
Identities = 138/164 (84%)
Strand = Plus / Plus
Query: 730 agtttgtatgctgctactaaaaaggctggagaggaaattgcacatacttataatcatatt 789
||||| ||||| ||||| |||||||| || |||||||| | ||||||||||||||||||
Sbjct: 724 agtttatatgcggctacgaaaaaggcaggtgaggaaatcactcatacttataatcatatt 783
Query: 790 tacggtctttcccttactggcttgcgctttttcacagtttatggaccatggggtagacca 849
|||||||| || ||||||| ||| | ||||| || || || || ||||||||||||||
Sbjct: 784 tacggtctgtcaattactgggttgagattttttactgtctacggtccatggggtagaccc 843
Query: 850 gatatggcttatttctttttcactagggatattttgaaagggaa 893
|||||||||||||||| |||||| || ||||||| |||||||
Sbjct: 844 gatatggcttatttctctttcacgagaaatattttacaagggaa 887
Score = 65.9 bits (33), Expect = 6e-10
Identities = 89/105 (84%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 1162 gacgttcagtttacacatgctaatattagtttggcacag-agggaacttggatataagcc 1220
||||||| |||||| |||||||||||||||||||| ||| || |||||||| ||||| ||
Sbjct: 1156 gacgttccgtttactcatgctaatattagtttggc-cagaagagaacttgggtataaacc 1214
Query: 1221 tagcacggatctgcaaacggggttgaagaaatttgtaagatggta 1265
| || ||| ||||||| ||||||||||| ||||| || |||||
Sbjct: 1215 gacaaccgatttgcaaaccgggttgaagaagtttgttaggtggta 1259
>30146.m003476 UDP-glucuronate 5-epimerase, putative
Length = 426
Score = 63.9 bits (32), Expect = 2e-09
Identities = 110/136 (80%)
Strand = Plus / Plus
Query: 599 ttgttagtttattagaagtttgtaaagaagcaaatccccaacctgcaattgtatgggcat 658
||||||||||| | || |||||||| || ||| || |||||||||||||| ||||| |
Sbjct: 212 ttgttagtttacttgaggtttgtaattcagtaaacccacaacctgcaattgtttgggctt 271
Query: 659 cttccagttctgtttatgggcttaatacaaaagtacccttttctgagaaagatagaactg 718
|||| ||||| |||||||| | ||| || || |||||||| ||||| |||| |||||
Sbjct: 272 cttcgagttcagtttatggattgaatctcaaggtgcccttttcagagaaggataaaactg 331
Query: 719 accaacctgctagttt 734
| |||||||| |||||
Sbjct: 332 atcaacctgcaagttt 347
Score = 52.0 bits (26), Expect = 9e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 817 tttttcacagtttatggaccatggggtagaccagatatggcttatttctttttcactagg 876
||||| || ||||||||||| ||||| || || || ||||| |||||||||||||| | |
Sbjct: 357 ttttttactgtttatggaccttggggaaggcctgacatggcctatttctttttcacgaag 416
Query: 877 gatattttga 886
|| |||||||
Sbjct: 417 gacattttga 426