Jatropha Genome Database
- JcCB0537831.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0537831.10 - phase: 1 /pseudo/partial
(1427 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30169.m006314 Casbene synthase, chloroplast precursor, putative 329 3e-89
30065.m001155 casbene synthase, putative 218 7e-56
29910.m000944 Terpinolene synthase, chloroplast precursor, putative 121 1e-26
29827.m002614 Casbene synthase, chloroplast precursor, putative 113 3e-24
30065.m001152 Casbene synthase, chloroplast precursor, putative 100 4e-20
29673.m000927 casbene synthase, putative 80 4e-14
30169.m006276 Casbene synthase, chloroplast precursor, putative 52 9e-06
>30169.m006314 Casbene synthase, chloroplast precursor, putative
Length = 1668
Score = 329 bits (166), Expect = 3e-89
Identities = 651/812 (80%), Gaps = 3/812 (0%)
Strand = Plus / Plus
Query: 559 aagacttaaatctggttgaagagcttccttatgtaagagacagaattgtggagatatatc 618
|||| |||||| ||| | ||||||||||||| ||||||| ||| | ||||||| ||||
Sbjct: 779 aagatttaaatttggctaaagagcttccttacataagagatagactcgtggagacctatc 838
Query: 619 tttgggcaattggagctcattttgagccgcaatatgctcttgctcgtgtgatgataacca 678
| |||||||||||||| ||||||||||| || ||||| ||| |||| | ||| || | |
Sbjct: 839 tctgggcaattggagcccattttgagcctcagtatgccctttctcgagcgatcatcgcta 898
Query: 679 agtatacaaaaatggtgtcagtggttgatgatacatatgatgcatatggtacacttgatg 738
||||||||| ||| || || | || ||||||||||| ||||||||||||||||||||||
Sbjct: 899 agtatacaacaatagtatccgcagtagatgatacatacgatgcatatggtacacttgatg 958
Query: 739 aactccaacagttcacaattgcgtttcaaaggtgtaatattgatgctattgatcagctac 798
||||||||| || |||| ||| ||||||||||| | ||||||||||||||| | ||||
Sbjct: 959 aactccaacgttttacaaatgcatttcaaaggtgcgacattgatgctattgatgaactac 1018
Query: 799 cagaatacatgaaagttctttatagggctgtgttgaatctttttgatgaaacaggaaatg 858
|||| ||||||||||||||||| |||||| |||||||| |||||||| ||| || | |||
Sbjct: 1019 cagattacatgaaagttctttacagggctttgttgaatttttttgatcaaatagaagatg 1078
Query: 859 atgagactgaaggaagatcccagagaacagcttatgctaaagaaactttcaaggaattgg 918
| | ||| ||||| ||| | || || || |||||| ||| | ||||| ||| |||
Sbjct: 1079 aagtcgatgagggaaggtcctacagtacttctgttgctaaggaagcgttcaaagaactgg 1138
Query: 919 tgagcgcatactttgtagaagcaaagtggtttaatgaggggtatgtgccaccattcgagg 978
|||| | |||| ||| || ||| | ||||||| ||| || ||||| ||| |||| || |
Sbjct: 1139 tgagatcctactatgttgaggcacaatggtttagtgatggctatgtaccatcatttgatg 1198
Query: 979 agtacataagcaatggattagtgtcgagcacttacagtgtacttccagcagcttccttta 1038
| || || |||||||||| | | |||||||| | |||||||||||||| |||||||
Sbjct: 1199 aatatatgcgcaatggattgatcacaagcacttataccgtacttccagcagcatccttta 1258
Query: 1039 ttggaatggaaaacgttgttggaagcaaagagtacgaatgggtaaaagaaaatcctaaaa 1098
||||||||||||| ||| ||| || || || | |||||| || ||||| ||||
Sbjct: 1259 ttggaatggaaaatactgtaggagagaaggaatataagtgggtacaaagcaatccaaaaa 1318
Query: 1099 ttgttaatgcttccaagttaatttgccgtctgatggatgacgtaacaacccacgagcatg 1158
| || || ||| | ||| |||||||||||||||||||||| |||| ||||| ||| |||
Sbjct: 1319 tcgtcaaagctgctaagataatttgccgtctgatggatgatataaccacccatgaggatg 1378
Query: 1159 agcaaaagagaggacactgtgcttcaggtgtcgaatgctacatgaaagagtatggtgttt 1218
|||||||||| ||||| ||||||||| || | ||||||||||||||||| |||||||| |
Sbjct: 1379 agcaaaagaggggacattgtgcttcaagtatagaatgctacatgaaagaatatggtgtgt 1438
Query: 1219 cagaaaaggaggccattgatgagatccagaaaatgtgtgcaaatgcctggaaggatatga 1278
| |||||| | ||||| || ||||| || ||||| ||||||||||| ||||| || ||||
Sbjct: 1439 ccgaaaagaaagccatagaagagattcaaaaaatatgtgcaaatgcatggaaagacatga 1498
Query: 1279 acgaagcatgcat---gaagccaactgaggtgtccaccactcttctcaagtattatgtca 1335
|||| | ||||| ||||||| || || || | ||||||||||||||||||||||
Sbjct: 1499 acgaggagtgcatgaagaagccacctactgtttcgaggactcttctcaagtattatgtca 1558
Query: 1336 atcttgcacgtgtcattgattttgtttacaag 1367
||||||| || || || |||||||| ||||||
Sbjct: 1559 atcttgcgcgggtaatagattttgtatacaag 1590
Score = 81.8 bits (41), Expect = 1e-14
Identities = 212/269 (78%)
Strand = Plus / Plus
Query: 238 tgaaaggccttcttggcttatatgaagctacctttctaagtgtgcatggagaagatattt 297
|||||||||||||| ||||||| ||||| | ||||||||||||||||||||| |||||
Sbjct: 431 tgaaaggccttcttagcttatacgaagcgagttttctaagtgtgcatggagaaaatattc 490
Query: 298 tagacgaagctcttgtttttacaaagcaacgcctagaaatcttagctgcacaatcgagtc 357
|||| ||||| | | ||||||| || || ||| ||| ||| |||| ||||| || |
Sbjct: 491 tagatgaagccatagcctttacaaggccactcctggaatcctttgctgatcaatcaagcc 550
Query: 358 ctcatcttgcaaaccgcataaggaatgctttactgcggccattccatcaaggcatagaaa 417
| ||||| ||||| ||||||||| || | ||||| || ||||| |||||| |||
Sbjct: 551 cccatctagcaaaatatataaggaattctctgctgcgccctcatcatcagggcatacaaa 610
Query: 418 gaatagagactcgccaatacatatcattttatggagaagaagagtctccaaatcaaactc 477
|| | ||| || | ||||||||| || |||| |||||| ||||||| ||| ||||||
Sbjct: 611 gagtggaggctaggcaatacataagtttctatgaagaagatgagtctcgcaatgaaactc 670
Query: 478 ttctcaagtttgcaaagcttgattttaat 506
|||| |||||||||||| | |||||||||
Sbjct: 671 ttcttaagtttgcaaagttggattttaat 699
>30065.m001155 casbene synthase, putative
Length = 471
Score = 218 bits (110), Expect = 7e-56
Identities = 284/342 (83%)
Strand = Plus / Plus
Query: 402 catcaaggcatagaaagaatagagactcgccaatacatatcattttatggagaagaagag 461
||||||||||||||||| ||||| || | |||||||| | || ||| || |||| |||
Sbjct: 127 catcaaggcatagaaaggttagaggctaggcaatacatctgtttctatagaaaagatgag 186
Query: 462 tctccaaatcaaactcttctcaagtttgcaaagcttgattttaatagactacaattatta 521
||| ||| ||||||| || |||||||||||| | ||||||||| | ||||||||||
Sbjct: 187 tcttgcaatgaaactctccttaagtttgcaaagttggattttaatcggttacaattattg 246
Query: 522 tacaaacaagagttagctttggtctcaaagtggtggaaagacttaaatctggttgaagag 581
|||||||||||| |||| | |||||||||||||||||||||||||||||| |||||||
Sbjct: 247 tacaaacaagagctagcctctctctcaaagtggtggaaagacttaaatctggctgaagag 306
Query: 582 cttccttatgtaagagacagaattgtggagatatatctttgggcaattggagctcatttt 641
|| ||||| | ||||| ||| ||||||||| |||||||||||||| ||| ||||||
Sbjct: 307 ctcccttacatgagagatagacttgtggagacttatctttgggcaatcggaaaccatttt 366
Query: 642 gagccgcaatatgctcttgctcgtgtgatgataaccaagtatacaaaaatggtgtcagtg 701
||||| || ||||| || |||| |||||||| || ||||||||| |||||| || |
Sbjct: 367 gagcctcagtatgccttttctcgagtgatgatcactaagtatacagtaatggtatccgca 426
Query: 702 gttgatgatacatatgatgcatatggtacacttgatgaactc 743
|| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 427 gtagatgatacatatgatgcatatggtacaattgatgaactc 468
>29910.m000944 Terpinolene synthase, chloroplast precursor, putative
Length = 1431
Score = 121 bits (61), Expect = 1e-26
Identities = 127/149 (85%)
Strand = Plus / Plus
Query: 197 ggacaacaatggagaattcaagaaaagcataagtgatgatgtgaaaggccttcttggctt 256
||||| ||||||||| ||||||||| | || | || ||| ||| |||||| ||| ||||
Sbjct: 300 ggacagcaatggagagttcaagaaatgtatgactgctgacgtgcgaggcctccttagctt 359
Query: 257 atatgaagctacctttctaagtgtgcatggagaagatattttagacgaagctcttgtttt 316
||| ||||| ||||||||||||||||||||||||||||||||||| ||||| |||| |||
Sbjct: 360 atacgaagccacctttctaagtgtgcatggagaagatattttagatgaagcacttgcttt 419
Query: 317 tacaaagcaacgcctagaaatcttagctg 345
||||| ||||| | | |||| ||||||||
Sbjct: 420 tacaaggcaacacttggaaaccttagctg 448
Score = 69.9 bits (35), Expect = 4e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 705 gatgatacatatgatgcatatggtacacttgatgaactccaacagttcaca 755
||||||||||||||| ||||||||||| ||||||||||| |||| ||||||
Sbjct: 691 gatgatacatatgattcatatggtacatttgatgaactcaaacatttcaca 741
>29827.m002614 Casbene synthase, chloroplast precursor, putative
Length = 1656
Score = 113 bits (57), Expect = 3e-24
Identities = 264/333 (79%)
Strand = Plus / Plus
Query: 233 tgatgtgaaaggccttcttggcttatatgaagctacctttctaagtgtgcatggagaaga 292
||||||||||||||| ||| |||| ||||||||| || || | ||||| |||||||||||
Sbjct: 444 tgatgtgaaaggcctccttagcttgtatgaagcttccgttgtgagtgttcatggagaaga 503
Query: 293 tattttagacgaagctcttgtttttacaaagcaacgcctagaaatcttagctgcacaatc 352
|||||||| ||||| ||||||||||||||||||| | | |||| | |||||||||
Sbjct: 504 gattttagatgaagcccttgtttttacaaagcaacacttggaaacactggctgcacaagt 563
Query: 353 gagtcctcatcttgcaaaccgcataaggaatgctttactgcggccattccatcaaggcat 412
|| |||||| ||| | | | |||||| |||||||| || | || |||| | |||||
Sbjct: 564 tagccctcattttgaacagcacataagaaatgctttgctttgtcctgtccactatggcat 623
Query: 413 agaaagaatagagactcgccaatacatatcattttatggagaagaagagtctccaaatca 472
|||||| || || |||| | ||| ||||| || || | ||| || ||||| |||| |
Sbjct: 624 ggaaagattacaggctcggctatatatatccttctacgaagaggacgagtccagaaatga 683
Query: 473 aactcttctcaagtttgcaaagcttgattttaatagactacaattattatacaaacaaga 532
| ||| ||||||||||||||||| ||||||||| ||||||| ||||| |||| | ||||
Sbjct: 684 gattctgctcaagtttgcaaagctcgattttaatcgactacagttattgtacagagaaga 743
Query: 533 gttagctttggtctcaaagtggtggaaagactt 565
| |||| | || |||| |||||||||||||||
Sbjct: 744 gctagcaatagtatcaaggtggtggaaagactt 776
Score = 73.8 bits (37), Expect = 3e-12
Identities = 139/173 (80%)
Strand = Plus / Plus
Query: 702 gttgatgatacatatgatgcatatggtacacttgatgaactccaacagttcacaattgcg 761
|||||||||||||||||||| |||||||| ||| |||||| || || ||| |||
Sbjct: 916 gttgatgatacatatgatgcttatggtaccattggcgaactcagactctttacagctgca 975
Query: 762 tttcaaaggtgtaatattgatgctattgatcagctaccagaatacatgaaagttctttat 821
||| ||||||| | ||||||||||||| || ||||||||||||||||| | ||||||
Sbjct: 976 tttgaaaggtgcagtattgatgctattcatgagctaccagaatacatgcagtatctttac 1035
Query: 822 agggctgtgttgaatctttttgatgaaacaggaaatgatgagactgaaggaag 874
| |||| | |||| |||||||| ||||||| ||||||| | |||||||||
Sbjct: 1036 aaggctatactgaaactttttgaagaaacagagaatgatgccaatgaaggaag 1088
Score = 56.0 bits (28), Expect = 6e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 134 gacctctatacttcggcacttctatttcaagttctgagacaacatgga 181
|||||||||||| ||||||| |||||| |||||| ||||||||||||
Sbjct: 325 gacctctatactgtggcacttttatttcgagttctaagacaacatgga 372
>30065.m001152 Casbene synthase, chloroplast precursor, putative
Length = 849
Score = 99.6 bits (50), Expect = 4e-20
Identities = 182/226 (80%)
Strand = Plus / Plus
Query: 594 agagacagaattgtggagatatatctttgggcaattggagctcattttgagccgcaatat 653
||||| ||| ||||||||| |||||||||||||| ||| ||||||||||| ||||||
Sbjct: 4 agagatagacttgtggagacttatctttgggcaatcggaaaccattttgagcctcaatat 63
Query: 654 gctcttgctcgtgtgatgataaccaagtatacaaaaatggtgtcagtggttgatgataca 713
|| || |||| | |||||| || ||||||||| ||| || || || |||||||||
Sbjct: 64 gccttttctcgagcgatgattactaagtatacagtaattgtatccacagtagatgataca 123
Query: 714 tatgatgcatatggtacacttgatgaactccaacagttcacaattgcgtttcaaaggtgt 773
|||||||||||||||||| ||||||||||||| || |||| ||| || | |||| |
Sbjct: 124 tatgatgcatatggtacaattgatgaactccagtgttttacaaatgcattcctaaggggc 183
Query: 774 aatattgatgctattgatcagctaccagaatacatgaaagttcttt 819
| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 184 gactttgatgctattgatggagtaccagaatacatgaaagttcttt 229
Score = 91.7 bits (46), Expect = 1e-17
Identities = 121/146 (82%)
Strand = Plus / Plus
Query: 1125 cgtctgatggatgacgtaacaacccacgagcatgagcaaaagagaggacactgtgcttca 1184
||||||||| ||||| || || |||| ||| ||||||||||||| ||||| ||||||||
Sbjct: 526 cgtctgatgaatgacatagcatcccatgaggatgagcaaaagaggggacattgtgcttcg 585
Query: 1185 ggtgtcgaatgctacatgaaagagtatggtgtttcagaaaaggaggccattgatgagatc 1244
| | | || ||||| ||||| | |||||||||||||||||| | |||||||| |||||
Sbjct: 586 gctatagagtgctatatgaaccaatatggtgtttcagaaaagaaagccattgaagagatt 645
Query: 1245 cagaaaatgtgtgcaaatgcctggaa 1270
|||||||| |||| | |||| |||||
Sbjct: 646 cagaaaatatgtggatatgcatggaa 671
>29673.m000927 casbene synthase, putative
Length = 816
Score = 79.8 bits (40), Expect = 4e-14
Identities = 157/196 (80%)
Strand = Plus / Plus
Query: 549 aagtggtggaaagacttaaatctggttgaagagcttccttatgtaagagacagaattgtg 608
||||||||||||||||||||||||| ||| ||| | | ||| | ||||| ||| | |||
Sbjct: 28 aagtggtggaaagacttaaatctggctgaggagttcctttacatgagagatagactcgtg 87
Query: 609 gagatatatctttgggcaattggagctcattttgagccgcaatatgctcttgctcgtgtg 668
|||| |||||||||||||| ||| |||||||||| || ||||| || |||| | |
Sbjct: 88 gagacttatctttgggcaatcggaaactattttgagcctcattatgccttttctcgagcg 147
Query: 669 atgataaccaagtatacaaaaatggtgtcagtggttgatgatacatatgatgcatatggt 728
| ||| || ||||||||| |||||| || | || |||||||||| |||||||||||
Sbjct: 148 acgatcactaagtatacagtaatggtatccgcagtaaatgatacataccatgcatatggt 207
Query: 729 acacttgatgaactcc 744
||| ||||||||||||
Sbjct: 208 acaattgatgaactcc 223
Score = 61.9 bits (31), Expect = 1e-08
Identities = 127/159 (79%)
Strand = Plus / Plus
Query: 893 tgctaaagaaactttcaaggaattggtgagcgcatactttgtagaagcaaagtggtttaa 952
|||||| ||| | ||||| ||| |||||| |||||| | || || ||| |||||||||
Sbjct: 363 tgctaacgaagcgttcaaagaactggtgaaagcatacatcgttgaggcacagtggtttag 422
Query: 953 tgaggggtatgtgccaccattcgaggagtacataagcaatggattagtgtcgagcactta 1012
||| || ||||||||| |||||| || || || ||||||||||| | ||||| ||
Sbjct: 423 tgatggctatgtgccattattcgatgaatatatgcgcaatggattaataacgagcggcta 482
Query: 1013 cagtgtacttccagcagcttcctttattggaatggaaaa 1051
|| |||||||||||||| || |||||||||||||||||
Sbjct: 483 tagagtacttccagcagcatcttttattggaatggaaaa 521
>30169.m006276 Casbene synthase, chloroplast precursor, putative
Length = 1845
Score = 52.0 bits (26), Expect = 9e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 37 tcgtcttggtgtttcgtatcaatttcgggctgagattgaagagcaactaagtcatatttt 96
|||||||||||| |||||||| ||| | ||| |||||||||||||| ||||| |||||
Sbjct: 366 tcgtcttggtgtctcgtatcattttgagaatgacattgaagagcaactgagtcaaatttt 425
Query: 97 ca 98
||
Sbjct: 426 ca 427