Jatropha Genome Database
- JcCB0535351.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0535351.10 - phase: 1 /pseudo/partial
(629 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30169.m006452 DNA-damage-inducible protein f, putative 642 0.0
29606.m000099 DNA-damage-inducible protein f, putative 88 7e-17
27810.m000635 DNA-damage-inducible protein f, putative 84 1e-15
29606.m000098 DNA-damage-inducible protein f, putative 80 2e-14
>30169.m006452 DNA-damage-inducible protein f, putative
Length = 1569
Score = 642 bits (324), Expect = 0.0
Identities = 513/576 (89%)
Strand = Plus / Plus
Query: 54 tcaggttttctgctactgatgagggtaatagctgtaacgttctgtgttactctttctgca 113
||||||||||| || |||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 949 tcaggttttcttttattgatgagggtgatagctgtaacgttctgtgttacactttctgca 1008
Query: 114 tcattagctgcacgacaaggatcaacagccatggctgcatttcaggtctgcttgcaggtt 173
||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||
Sbjct: 1009 tcattagctgcacgacaaggatcaatatccatggctgcatttcaagtctgcttgcaggtt 1068
Query: 174 tggctggccacatctcttcttgctgatggattggctgttgctggccaggcaatacttgca 233
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1069 tggctggccacatctcttctcgctgatggattggctgttgctggccaggcaatacttgca 1128
Query: 234 accgcctttgccaaaagtgactatgagaaggcaacagccactgcatctcgagtattgcag 293
| || ||||||||| | || ||||| ||||||| ||| || |||||||| ||||| |||
Sbjct: 1129 agtgcttttgccaaaggggagtatgacaaggcaatagcgacagcatctcgtgtattacag 1188
Query: 294 ttggggttgcttctgggattgatgctggctattatactcggagtaggactgagttttgga 353
||||| |||||||||||||| ||||||||| | |||||||| |||| | || | ||||
Sbjct: 1189 ttgggattgcttctgggattaatgctggctgtcgtactcggactaggtttaagctatgga 1248
Query: 354 tcaagattattcacaagtgatgtcaatgttctacgcatgattagcataggcattccgttt 413
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||||||||
Sbjct: 1249 gcaagattattcactagtgatgtcaatgttctccacatgattagtataggcattccgttt 1308
Query: 414 gttgcaggtactcaacccatcaatgccttggcttttgtatttgatggtgtcaactttgga 473
|||||||| || ||||||||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 1309 gttgcaggaacgcaacccatcaacgccttagcatttgtatttgatggtgtcaactttgga 1368
Query: 474 gcttctgatttcgcatactctgcctactccatggttctggtggccattattagcatcctg 533
||||||||||| ||||||||||| ||||||||||||||||||||| || |||||| |
Sbjct: 1369 gcttctgattttgcatactctgcatactccatggttctggtggccgttggaagcatcttt 1428
Query: 534 tctttgttatttctatcctccacttataagttcattggaatatgggttgctctgactata 593
| ||| | ||||| || ||| ||||||||||||||||| | |||||||||||||| |||
Sbjct: 1429 tgtttactttttctctcttccgcttataagttcattggagtctgggttgctctgacaata 1488
Query: 594 tatatgagtctccggacatctgctggattttggagg 629
|||||| ||||||| ||||||||||||||||||||
Sbjct: 1489 tatatgggtctccgtgcatctgctggattttggagg 1524
>29606.m000099 DNA-damage-inducible protein f, putative
Length = 1557
Score = 87.7 bits (44), Expect = 7e-17
Identities = 98/116 (84%)
Strand = Plus / Plus
Query: 396 agcataggcattccgtttgttgcaggtactcaacccatcaatgccttggcttttgtattt 455
|||||||||||||| |||||||||| ||| |||| || ||| | | || ||||||||
Sbjct: 1270 agcataggcattccatttgttgcagctacacaacatattaattcaatagcccttgtattt 1329
Query: 456 gatggtgtcaactttggagcttctgatttcgcatactctgcctactccatggttct 511
|||||||| |||||||||||||||||||| ||||| ||||| || || ||||||||
Sbjct: 1330 gatggtgtaaactttggagcttctgattttgcatattctgcatattcaatggttct 1385
Score = 56.0 bits (28), Expect = 3e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 144 atggctgcatttcaggtctgcttgcaggtttggctggccacatctcttcttgctgatgga 203
||||||||||| || ||||||| ||||| |||||| | |||| ||||||||||||||
Sbjct: 1018 atggctgcattccaaatctgcttacaggtctggctgacatcatcacttcttgctgatggt 1077
Query: 204 ttggctgttgctggccaggc 223
|| |||||||||| |||||
Sbjct: 1078 ttaactgttgctggacaggc 1097
>27810.m000635 DNA-damage-inducible protein f, putative
Length = 2721
Score = 83.8 bits (42), Expect = 1e-15
Identities = 180/226 (79%)
Strand = Plus / Plus
Query: 70 tgatgagggtaatagctgtaacgttctgtgttactctttctgcatcattagctgcacgac 129
||||||||||||||||| ||| |||||||| ||||| | |||||| | |||||| |||
Sbjct: 2132 tgatgagggtaatagcttcaacattctgtgtcactctggcagcatcacttgctgcaagac 2191
Query: 130 aaggatcaacagccatggctgcatttcaggtctgcttgcaggtttggctggccacatctc 189
| ||||| || | ||||||||||||||||| ||||||||| || | || | || |||
Sbjct: 2192 atggatctacttcaatggctgcatttcaggtttgcttgcagattggcatgtcaacttctt 2251
Query: 190 ttcttgctgatggattggctgttgctggccaggcaatacttgcaaccgcctttgccaaaa 249
| ||||| ||||| ||||||| || || || ||||| ||||| | || ||||| || |
Sbjct: 2252 tgcttgcagatgggctggctgtggccggacaagcaatccttgctagtgcttttgcaaata 2311
Query: 250 gtgactatgagaaggcaacagccactgcatctcgagtattgcagtt 295
|||||||| ||||| | ||||||||| ||||| |||||||||||
Sbjct: 2312 acgactatgacaaggccaaagccactgcttctcgtgtattgcagtt 2357
>29606.m000098 DNA-damage-inducible protein f, putative
Length = 1641
Score = 79.8 bits (40), Expect = 2e-14
Identities = 97/116 (83%)
Strand = Plus / Plus
Query: 396 agcataggcattccgtttgttgcaggtactcaacccatcaatgccttggcttttgtattt 455
|||||||||||||| |||||||||| ||| ||||| || || | | || ||||||||
Sbjct: 1354 agcataggcattccatttgttgcagctacacaacctattaactcaatagcctttgtattc 1413
Query: 456 gatggtgtcaactttggagcttctgatttcgcatactctgcctactccatggttct 511
|||||||| ||||| |||||||||||||| ||||| ||||| || || ||||||||
Sbjct: 1414 gatggtgtaaacttcggagcttctgattttgcatattctgcatattcaatggttct 1469
Score = 77.8 bits (39), Expect = 7e-14
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 144 atggctgcatttcaggtctgcttgcaggtttggctggccacatctcttcttgctgatgga 203
||||||||||||||| ||||||| ||||| ||| || | |||| ||||||||||||||
Sbjct: 1102 atggctgcatttcagatctgcttacaggtctggttgacatcatcacttcttgctgatggc 1161
Query: 204 ttggctgttgctggccaggcaat 226
|| ||||||||||| ||||||||
Sbjct: 1162 ttagctgttgctggacaggcaat 1184