Jatropha Genome Database

JcCB0531841.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0531841.10 + phase: 1 /pseudo/partial
         (961 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29736.m002087 conserved hypothetical protein                          240   1e-62

>29736.m002087 conserved hypothetical protein
          Length = 1218

 Score =  240 bits (121), Expect = 1e-62
 Identities = 244/285 (85%)
 Strand = Plus / Plus

                                                                       
Query: 659 tcttgccattaaaaggcttagtgcttgtaagctgagtgagaagcagtttaggtctgagat 718
           |||||| ||||||||||| |||||||||||||| || |||||||||||||||||||| ||
Sbjct: 564 tcttgctattaaaaggctcagtgcttgtaagctcagcgagaagcagtttaggtctgaaat 623

                                                                       
Query: 719 gaataggttaggccaactcaggcatccaaatttggtgcctttgttagggttttgtattgt 778
           |||||  |||| |||||| |||||||| |||||||||||||| || | ||||| | || |
Sbjct: 624 gaataaattagcccaacttaggcatcctaatttggtgcctttattggagttttatgttat 683

                                                                       
Query: 779 tgaagaagagagactgttggtttataagcatatgcctaatggtactttgtattctcaact 838
           ||||||||||||| | |||| ||||||||||||||||||||| || ||| ||||| ||||
Sbjct: 684 tgaagaagagagattattggcttataagcatatgcctaatgggaccttgcattctgaact 743

                                                                       
Query: 839 gcatgggagtggatttggtgttagtccctctggtgttttggattggcctgctagaattag 898
           ||||||  ||||||||||  | ||||| |||| |||| | ||||| ||| | ||  ||||
Sbjct: 744 gcatggttgtggatttggcatcagtccttctgatgttctagattgtcctaccagggttag 803

                                                        
Query: 899 gatcggtgttggtgcagctagagggcttgcttggctccaccatgg 943
           ||| ||||||||||| |||||||| ||||||||||| ||||||||
Sbjct: 804 gattggtgttggtgctgctagaggccttgcttggcttcaccatgg 848