Jatropha Genome Database

JcCB0531541.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0531541.10 - phase: 1 /pseudo/partial
         (275 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m014102 transcription regulator, putative                       176   4e-44

>30147.m014102 transcription regulator, putative
          Length = 276

 Score =  176 bits (89), Expect = 4e-44
 Identities = 134/149 (89%)
 Strand = Plus / Plus

                                                                       
Query: 127 aggtttcagcagccaaggtgttgcaggagacatgcaactacatcagaaacttgcacagag 186
           |||||||||| || ||||||||||||||||| |||||||| ||||||| |||||||||||
Sbjct: 125 aggtttcagctgcgaaggtgttgcaggagacttgcaactatatcagaagcttgcacagag 184

                                                                       
Query: 187 aagtcgatgatctaagtgagaggctatctgagttattggcaactactgacactgctcaag 246
           |||| |||||||| || ||| |||| || ||| |||||||||||||||||||||| ||||
Sbjct: 185 aagttgatgatcttagcgagcggctctcagagctattggcaactactgacactgcccaag 244

                                        
Query: 247 ctgccataattaggaatttactaatgcaa 275
           |||| ||||||||||||||||| ||||||
Sbjct: 245 ctgctataattaggaatttacttatgcaa 273