Jatropha Genome Database
- JcCB0510081.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0510081.10 - phase: 0
(357 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29693.m002025 60S ribosomal protein L18a, putative 355 1e-97
29989.m000434 60S ribosomal protein L18a, putative 283 3e-76
>29693.m002025 60S ribosomal protein L18a, putative
Length = 912
Score = 355 bits (179), Expect = 1e-97
Identities = 302/343 (88%)
Strand = Plus / Plus
Query: 15 gatctttgagaagaacccaactaagatcaagaattatggcatttggttgcgttaccaaag 74
|||||||||||| |||||||| ||||||||||| ||||| || ||| |||| ||||||||
Sbjct: 570 gatctttgagaaaaacccaaccaagatcaagaactatggaatatggctgcgctaccaaag 629
Query: 75 ccgaactggctatcacaacatgtacaaggaatacagagataccactttgaatggtgctgt 134
|||||||| || ||||| ||||||||||||||| |||||||||| | |||||||||||
Sbjct: 630 tcgaactgggtaccacaatatgtacaaggaataccgagataccacacttaatggtgctgt 689
Query: 135 ggaacagatgtacactgagatggcttcccgacacagagtaaggttcccatgcattcagat 194
||||| |||||||||||||||||||| || |||||||| |||||||| || ||||||||
Sbjct: 690 tgaacaaatgtacactgagatggcttctcgtcacagagtcaggttcccttgtattcagat 749
Query: 195 aatcaagactggcaccattccagctaagctctgcaaaagagaaagcagcaagcaattcca 254
|| ||||||| || |||||||||||||| ||||| ||||| |||| |||||| |||||
Sbjct: 750 tattaagactgcaactattccagctaagctatgcaagagagagagcaccaagcagttcca 809
Query: 255 caactcgaagatcaagttcccattggtgttcaagaaggttaggccaccaaccaggaagct 314
|||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 810 caactccaagattaagtttccattggtgttcaagaaggttagaccaccaaccagaaagct 869
Query: 315 taggacaacatacaaggcatccaggcccaacctatttatgtaa 357
| |||||||||||||||||||||||| ||| |||||||||||
Sbjct: 870 caagacaacatacaaggcatccaggcctaacttatttatgtaa 912
>29989.m000434 60S ribosomal protein L18a, putative
Length = 537
Score = 283 bits (143), Expect = 3e-76
Identities = 290/339 (85%)
Strand = Plus / Plus
Query: 19 tttgagaagaacccaactaagatcaagaattatggcatttggttgcgttaccaaagccga 78
|||||||||| || || ||||| ||||| ||||| || |||||| | ||||||||| ||
Sbjct: 199 tttgagaagagtcctaccaagattaagaactatggtatctggttgagataccaaagcaga 258
Query: 79 actggctatcacaacatgtacaaggaatacagagataccactttgaatggtgctgtggaa 138
||||| ||||| ||||||||||||||||||||||| || ||| | |||||||||||||||
Sbjct: 259 actgggtatcataacatgtacaaggaatacagagacactactcttaatggtgctgtggaa 318
Query: 139 cagatgtacactgagatggcttcccgacacagagtaaggttcccatgcattcagataatc 198
||||||||||||||||||||||| || ||| ||||||||||| ||||||||||||| |||
Sbjct: 319 cagatgtacactgagatggcttctcgtcaccgagtaaggttctcatgcattcagatcatc 378
Query: 199 aagactggcaccattccagctaagctctgcaaaagagaaagcagcaagcaattccacaac 258
|| || | |||||| ||||||||||| ||||| || || |||| ||||| |||||||||
Sbjct: 379 aaaacagccaccataccagctaagctttgcaagagggagagcactaagcagttccacaac 438
Query: 259 tcgaagatcaagttcccattggtgttcaagaaggttaggccaccaaccaggaagcttagg 318
|| || || ||||||||| ||||||| ||||||||||||||||| | ||||| |||| |
Sbjct: 439 tctaaaattaagttcccactggtgtttaagaaggttaggccacccagtaggaaacttaag 498
Query: 319 acaacatacaaggcatccaggcccaacctatttatgtaa 357
|| ||||| ||||| || ||||||||| | |||||||||
Sbjct: 499 accacatataaggcttcaaggcccaacttgtttatgtaa 537