Jatropha Genome Database
- JcCB0507301.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0507301.10 - phase: 0 /partial
(664 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29613.m000358 omega-6 desaturase, endoplasmic reticulum 539 e-153
>29613.m000358 omega-6 desaturase, endoplasmic reticulum
Length = 1152
Score = 539 bits (272), Expect = e-153
Identities = 566/664 (85%)
Strand = Plus / Plus
Query: 1 atgggtgccggtggcagaatgtctgttcctccttcccccaagaagttggaagctgaggtc 60
|||||||| |||||||||||||||||||||||| | | ||||| ||||| | || | |
Sbjct: 1 atgggtgctggtggcagaatgtctgttcctcctccatctaagaaagtggaatccgatgac 60
Query: 61 ttgaaacgagttccatactcgaagccaccattcacacttggtcaggtcaagaaagctatc 120
||||| |||| ||| | ||| ||||| |||||||| ||||||||| ||||||| || |||
Sbjct: 61 ttgaagcgagctccctcctcaaagccgccattcacccttggtcagatcaagaaggccatc 120
Query: 121 ccacctcattgtttccagcgttctgttctccgctcattctcgtatgttgtttatgacctg 180
||||||||||||||| |||| ||| ||| |||||||||||| ||||| |||||||| |||
Sbjct: 121 ccacctcattgtttcaagcgatctattccccgctcattctcatatgtcgtttatgatctg 180
Query: 181 acccttgcctttatcttttattatgttgccaccaattacttccacctccttcctcaaccc 240
||| |||||||| |||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 181 accattgcctttctcttctattatgttgccaccaattacttccacctccttcctgaacct 240
Query: 241 ctctcttatgtggcctggccaatttactggtccctccaaggctgtgtcctcactggcatt 300
|| ||||||||||||||||||||||||||| | |||||||| || ||||||||||| ||
Sbjct: 241 ctatcttatgtggcctggccaatttactgggctctccaaggatgcgtcctcactggtgtt 300
Query: 301 tgggttatagcacatgagtgtgggcatcatgcctttagtgactatcaatggcttgatgac 360
||||||||||||||||||||||| || |||||||| ||||||||||||| |||||||||
Sbjct: 301 tgggttatagcacatgagtgtggccaccatgccttcagtgactatcaattgcttgatgat 360
Query: 361 atagttggccttctcctccattcctgtctccttgtcccttacttttcatggaaacatagc 420
||||||| ||| |||| || |||||||||||||||||||| |||||||||||||| |||
Sbjct: 361 gtagttggtcttatcctacactcctgtctccttgtcccttatttttcatggaaacacagc 420
Query: 421 caccgccgtcatcactctaacaccggttcccttgagcgagatgaagtatttgtccctaaa 480
|| ||||| ||||| || ||||| || ||||| || || |||||||| ||||| || ||
Sbjct: 421 catcgccgacatcattccaacacagggtccctggaacgggatgaagtgtttgttcccaag 480
Query: 481 aagaaatccaacatccgctggttctccaaataccttaacaacctaccaggccgcctattc 540
|||||||| | ||||| |||| ||||||||||| ||||||| ||||| || | |
Sbjct: 481 aagaaatctagtatccgttggtattccaaatacctcaacaaccctccaggtcgtatcatg 540
Query: 541 actcttaccataacacttgcccttggctggccgctatacctagcatttaatgtttcaggc 600
|| || || | |||||| | ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 541 acaattgccgtcacacttacacttggctggcctctgtacctagcattcaatgtttcaggc 600
Query: 601 aggcattatgaccgatttgcctgtcactttgacccatatggccctatctacaatgatcgc 660
|||| ||||| || || ||||| |||| ||||||||||||||| |||||||||||||||
Sbjct: 601 aggccatatgatcggttcgcctgccactatgacccatatggcccgatctacaatgatcgc 660
Query: 661 gagc 664
||||
Sbjct: 661 gagc 664