Jatropha Genome Database

JcCB0506361.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0506361.10 + phase: 0 /pseudo/partial
         (705 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29648.m002007 8-oxoguanine DNA glycosylase, putative                  396   e-110

>29648.m002007 8-oxoguanine DNA glycosylase, putative
          Length = 1239

 Score =  396 bits (200), Expect = e-110
 Identities = 368/424 (86%)
 Strand = Plus / Plus

                                                                        
Query: 16   agagcaaaatatataactggcactgtagatgctctgcagtcaaaacctggtggaggtgcg 75
            |||||||||||||||||||| ||  |||||||| |||| | |||||||||||| ||||  
Sbjct: 670  agagcaaaatatataactggaaccatagatgctttgcaattaaaacctggtggtggtgtt 729

                                                                        
Query: 76   gaatggctttcatctcttcgtaaatcggatctccaagtggtggttgatgctctttgtact 135
            || |||||| |  ||||||| |||| |||||| ||||||||| |||||||||||||||| 
Sbjct: 730  gagtggcttacggctcttcggaaattggatcttcaagtggtgattgatgctctttgtaca 789

                                                                        
Query: 136  ttacctggagttggtcccaaagtggcatcgtgcatagctcttttctctcttgatcagcat 195
            ||||||||||||||||| ||||||||| | ||||| ||||| || || || ||||| || 
Sbjct: 790  ttacctggagttggtccaaaagtggcagcttgcattgctctattttcactggatcaacac 849

                                                                        
Query: 196  catgccattcctgttgatacgcacgtgtggcagatcgctacaagatacctcctgcctgag 255
            ||||| ||||||||||||||||| ||||||||||| ||||||||| ||||||| ||||||
Sbjct: 850  catgctattcctgttgatacgcatgtgtggcagattgctacaagacacctcctacctgag 909

                                                                        
Query: 256  cttgcagctgtccgcctgacacccaagttatgcagccgagtggcagatgcatttgtaagc 315
            ||||||| || |||| |||| || ||| ||||||||||||||||||||||||||||||||
Sbjct: 910  cttgcaggtgcccgcttgacgcctaagctatgcagccgagtggcagatgcatttgtaagc 969

                                                                        
Query: 316  aaatatgggaaatatgcaggatgggcacaaactcttctttttattgctgagttgccctca 375
            ||||||||||||||||| || |||||||||||| | ||||| ||||||||||||||| ||
Sbjct: 970  aaatatgggaaatatgctggctgggcacaaactttacttttcattgctgagttgccccca 1029

                                                                        
Query: 376  caaaaaactcttttaccttcccatttttggactatcaatgagaagaaatctgctactaag 435
            |||||| |||||||||| ||   |||||||||| |||| ||||  ||||||||||  |||
Sbjct: 1030 caaaaatctcttttaccatcaagtttttggactgtcaaagagattaaatctgctaacaag 1089

                
Query: 436  aaag 439
            ||||
Sbjct: 1090 aaag 1093