Jatropha Genome Database

JcCB0504061.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0504061.20 + phase: 1 /pseudo/partial
         (218 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m008801 malate dehydrogenase, putative                           88   2e-17

>30174.m008801 malate dehydrogenase, putative
          Length = 999

 Score = 87.7 bits (44), Expect = 2e-17
 Identities = 145/176 (82%), Gaps = 2/176 (1%)
 Strand = Plus / Plus

                                                                       
Query: 19  agagtattggtcaccggtgctgctgggcaaataggctatgctcttg-tccaatggtagca 77
           ||||| |||||||| || |||||||||||||||||||||||| | | ||||||| | |||
Sbjct: 19  agagttttggtcactggcgctgctgggcaaataggctatgctatcgttccaatgattgca 78

                                                                       
Query: 78  agagggatcatgttagggctagatcagcctgtaattcttcacatgcttgatattgaatct 137
           || ||  ||||| |||| |  ||||| ||||||||||| ||| |||||||||| ||| ||
Sbjct: 79  aggggagtcatgctaggtcctgatcaacctgtaattctccacttgcttgatatagaacct 138

                                                                   
Query: 138 gcagctaaggccctggaaggagt-gaaatggaattaattgatgcttcctttcctct 192
           ||| || ||||| || |||| ||  |||||||| | || |||||| ||||||||||
Sbjct: 139 gcatctgaggccttgaaaggggtaaaaatggaacttatagatgctgcctttcctct 194