Jatropha Genome Database
- JcCB0499871.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0499871.10 - phase: 0
(834 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29711.m000322 DNA binding protein, putative 662 0.0
29830.m001386 DNA binding protein, putative 64 1e-09
>29711.m000322 DNA binding protein, putative
Length = 951
Score = 662 bits (334), Expect = 0.0
Identities = 654/760 (86%), Gaps = 3/760 (0%)
Strand = Plus / Plus
Query: 63 agatccagatagacccaaaaatgacaaagcaaccattctggctgatacaattcaactgtt 122
|||||| |||| |||||||||||||||||||| || || ||||||| ||||| || |
Sbjct: 183 agatcctgataagcccaaaaatgacaaagcaactatcctaactgatactattcagttgct 242
Query: 123 aaaggatttgacatctcaagtcaacaaactcaaggcggagtacactacattgactgaaga 182
|||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||
Sbjct: 243 aaaggatttgacatctcaagtcaacaaacttaaggtggagtatgctaccttgactgaaga 302
Query: 183 atctcgtgagttgacacaagagaaaaatgacctcagagaagagaaggcgtctctcaaatc 242
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 303 atctcgtgagttgacacaagagaaaaatgacctcagagaagagaaggcatctcttaaatc 362
Query: 243 tgacattgagaatcttaatattcagtatcagcaaagactcaggtctacatacccatgggt 302
||| ||||||||||| ||||||||||| ||||||||| |||| | |||||||| |||||
Sbjct: 363 tgaaattgagaatctaaatattcagtaccagcaaagagccagggccacatacccgtgggt 422
Query: 303 tgctatggatcactcggttgttatggccccaacttcttatccctaccctatgccagtaac 362
||| ||||||||||| ||||||||||| |||||||||||||||| || ||||||| | |
Sbjct: 423 tgccatggatcactcagttgttatggctccaacttcttatcccttccttatgccaatgcc 482
Query: 363 aatacctccagggccaattccattgcatccgtccatgcaaccataccctttcttcggaaa 422
|||||||||| |||| ||| | |||||||| |||||||||||||||| ||||| |||||
Sbjct: 483 aatacctccaaggccgatttctttgcatccaaccatgcaaccataccccttctttggaaa 542
Query: 423 tcagaatcctgcagttatccacaatccatgttcaacttttgttccatatgtgacccctaa 482
||||||||| |||| ||||| ||||| | ||||| ||||||||||||| |||||||||
Sbjct: 543 ccagaatcctacagtaatccataatccctattcaatttttgttccatatatgacccctag 602
Query: 483 caccttggttgatcagcagtctacccaacgtgcatcttcatttgcacagcctgccagtgg 542
|||||||||| |||||||| ||||||| |||| |||||| ||||| |||||| |||||
Sbjct: 603 tgccttggttgaacagcagtccacccaacatgcaacttcatctgcactgcctgctagtgg 662
Query: 543 atcccatgtttcaggaaaacaagattccaagattaaattgtcgggggagagcaaggttgg 602
||||||||||||||| ||| |||| || |||| ||||| || |||| || ||| |||
Sbjct: 663 atcccatgtttcaggcaaagaagactcaaagaataaatcatcaagggaaagtaagactgg 722
Query: 603 aaaaagtttggactcaaatgacgttacaacagagttggagttgaagactccaggatctat 662
|||||||| |||||| ||||| || ||||||||| | ||||||||||||||||||||||
Sbjct: 723 aaaaagttgggactctaatgatgtcacaacagagctagagttgaagactccaggatctac 782
Query: 663 gacagatcaggatttatcctcgggacacaaaaagtccaaaaaatctccagggaaggaaaa 722
||||||| ||||||||| || |||| | ||||||||||||||| | |||||||||||
Sbjct: 783 aacagatccggatttatcttcaagacaaagaaagtccaaaaaatcactggggaaggaaaa 842
Query: 723 tagtgttacagaagggagttgttcaagtaggtgttcttcagctcgcagtgtccaggatag 782
|||| ||||||| ||||||| | ||||||||||||| || || |||||||| |||||
Sbjct: 843 tagtattacagatgggagttctacaagtaggtgttcatcc---cgtagtgtccaagatag 899
Query: 783 ctcatccactagcatagttggtagcacaaaggcagatgac 822
|||||| | |||||||| ||||||| ||||||| ||||||
Sbjct: 900 ctcatctagtagcatagctggtagcccaaaggctgatgac 939
>29830.m001386 DNA binding protein, putative
Length = 954
Score = 63.9 bits (32), Expect = 1e-09
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 67 ccagatagacccaaaaatgacaaagcaaccattctggctgatacaattcaactgttaaag 126
|||||||| ||||||||||| || ||||||||| || |||| ||||||||| || | |||
Sbjct: 208 ccagataggcccaaaaatgataaggcaaccattttgactgacacaattcaaatgctgaag 267
Query: 127 gatttgacatctcaagtcaacaaactcaaggc 158
||| ||||| || |||||| || ||| |||||
Sbjct: 268 gatctgacagctgaagtcagcagactaaaggc 299