Jatropha Genome Database
- JcCB0496181.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0496181.10 - phase: 0 /pseudo
(765 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
27383.m000156 triosephosphate isomerase, putative 549 e-156
30028.m000254 triosephosphate isomerase, putative 100 2e-20
>27383.m000156 triosephosphate isomerase, putative
Length = 765
Score = 549 bits (277), Expect = e-156
Identities = 401/441 (90%), Gaps = 1/441 (0%)
Strand = Plus / Plus
Query: 244 gaggtggtgataagccctccatttgtgtttcttccactggtgaaaagttcattgaggccc 303
||||| |||||||||||||||||||||||||| || ||||||||| |||| ||| |||
Sbjct: 115 gaggttgtgataagccctccatttgtgtttctcccgctggtgaaagattcactgaagcct 174
Query: 304 gattttcatgttgcggcacaaaattgttgggtaaagaaaggaggtgctttcaccggtgaa 363
||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||| |||
Sbjct: 175 gattttcatgttgcggctcaaaattgttgggtcaagaaaggtggtgcttttaccggcgaa 234
Query: 364 gttagtgctgaaatgcttgtgaatctggctattctgtgggtcattctcggccattctgaa 423
|||||||| |||||||||||||||||| ||||| ||||| ||||| ||||||||||||
Sbjct: 235 gttagtgcggaaatgcttgtgaatctgagtattccttgggtaattcttggccattctgaa 294
Query: 424 aggagacttctcttaactgagtcaaatgagtttgttggagataaggttgcatatgcactt 483
|| |||||||| |||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 295 agaagacttcttttaagcgagtcaaatgagtttgttggggataaggttgcatatgcactt 354
Query: 484 tcacaaggtttaaaggtgattgcttgtgtgggtgagactctcgaacagcgtgaagcagga 543
|| |||||||||||||| || ||||| || |||||||||||||| ||||||||||| |||
Sbjct: 355 tctcaaggtttaaaggtaatagcttgcgtcggtgagactctcgagcagcgtgaagcggga 414
Query: 544 tctaccttggaagttgttgctgcacaaaccaaagcaatagcagcacgtataaagaattgg 603
|||||| |||| ||||||||||||||||||||||||||||||| ||| ||||| |||||
Sbjct: 415 tctaccatggatgttgttgctgcacaaaccaaagcaatagcagaacgagtaaaggattgg 474
Query: 604 acagatgttgttttggcatatgagcctgtgtgggctattggaacaggggaaggttgcaac 663
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 475 gcagatgttgttttggcatatgagcctgtgtgggctattggaaca-gggaaggttgcaac 533
Query: 664 tcctgctcaggcacaggaagt 684
|||||||||||||||||||||
Sbjct: 534 tcctgctcaggcacaggaagt 554
Score = 117 bits (59), Expect = 1e-25
Identities = 101/115 (87%)
Strand = Plus / Plus
Query: 1 atggccaggaagtttttcgtcggtggcaattggaaatgcaatggaaccactgaagatgtg 60
|||||||||||||||||||| || ||||| ||||||||||||||||| | |||||| |||
Sbjct: 1 atggccaggaagtttttcgttggcggcaactggaaatgcaatggaacaagtgaagaagtg 60
Query: 61 aagaagatagtctccactctcaacgaaggtcaggtgccgtcatctgatgttgttg 115
||||||||||||||||| ||||| ||||| || ||||| || || ||||| ||||
Sbjct: 61 aagaagatagtctccacactcaatgaagggcacgtgccatcctcagatgtggttg 115
>30028.m000254 triosephosphate isomerase, putative
Length = 357
Score = 99.6 bits (50), Expect = 2e-20
Identities = 161/198 (81%)
Strand = Plus / Plus
Query: 256 agccctccatttgtgtttcttccactggtgaaaagttcattgaggcccgattttcatgtt 315
|||||||||||||| |||||||| |||| ||||||| |||||| ||||| || || |||
Sbjct: 127 agccctccatttgtatttcttcctttggtcaaaagtttattgagacccgacttccaggtt 186
Query: 316 gcggcacaaaattgttgggtaaagaaaggaggtgctttcaccggtgaagttagtgctgaa 375
|| |||||||| |||||||| ||||| ||||| || || || || |||||||||||
Sbjct: 187 gcagcacaaaactgttgggttcgcaaaggtggtgcctttactggggaggttagtgctgag 246
Query: 376 atgcttgtgaatctggctattctgtgggtcattctcggccattctgaaaggagacttctc 435
||||| ||||| || | |||| ||||||||||| || ||||||||| | ||| |||
Sbjct: 247 atgctcttgaatttgtccattccttgggtcattcttggacattctgaacgtagagctctt 306
Query: 436 ttaactgagtcaaatgag 453
|||| |||||||||||||
Sbjct: 307 ttaaatgagtcaaatgag 324
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 10 aagtttttcgtcggtggcaattggaaatgcaatggaaccactgaagatgtgaagaagat 68
|||||||||||||| ||||| ||||||||||||||||| ||||| || || ||||||||
Sbjct: 10 aagtttttcgtcggcggcaactggaaatgcaatggaacaactgaggaggttaagaagat 68