Jatropha Genome Database

JcCB0495231.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0495231.10 + phase: 0 /partial
         (662 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30169.m006419 copper-transporting atpase p-type, putative             492   e-138

>30169.m006419 copper-transporting atpase p-type, putative
          Length = 2907

 Score =  492 bits (248), Expect = e-138
 Identities = 496/578 (85%), Gaps = 3/578 (0%)
 Strand = Plus / Plus

                                                                       
Query: 37  aatgggaaggatgatcttaaggcacctctgctgcagcctccagatgatgttgcaattgct 96
           |||||||||||||  || ||||||||||| ||||||||||||||| |||| ||||||  |
Sbjct: 13  aatgggaaggatggcctaaaggcacctctactgcagcctccagataatgtagcaattagt 72

                                                                       
Query: 97  gtccctaaacagaaagataacagagataagaa---ggttaaaaccattaggttcaaaata 153
           || |||||||| || |||  ||||||||| ||   ||||||||| |||| | ||||||| 
Sbjct: 73  gttcctaaacacaaggatggcagagataataataaggttaaaacgattaagctcaaaatt 132

                                                                       
Query: 154 ggggatatcaagtgcgcctcttgtgcagcatccatagaatctgtgctgggagagcttagt 213
           ||||| ||||||||| ||||||||||| ||||| ||||||| |||||    ||||||| |
Sbjct: 133 ggggaaatcaagtgcacctcttgtgcaacatccgtagaatccgtgcttcaggagcttaat 192

                                                                       
Query: 214 ggagttgagaaggctatggtatcaccccttgatggccatgctgctatctcttacatacca 273
           |||||||| | || | ||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 193 ggagttgacagggttgtggtatcgccccttgatggccatgctgctatctcttacgtacca 252

                                                                       
Query: 274 gagttcgttactgctcaaaaaattaaggaaaccatagaagatgctggttttccggttgat 333
           ||  |||||||||||||||| || ||||||| |||||||| ||| || ||||||||||||
Sbjct: 253 gacctcgttactgctcaaaatatcaaggaaagcatagaagctgcaggatttccggttgat 312

                                                                       
Query: 334 gagttcccagaacaagaaatatcagtatgcaggctcaggattaaaggaatggcatgcact 393
           || || |||||||||||||| ||||||||| |||| |||||||||||||||||||| || 
Sbjct: 313 gaatttccagaacaagaaatttcagtatgccggctgaggattaaaggaatggcatgtacc 372

                                                                       
Query: 394 agctgctctgagtctgttgaacgcgccctcttaatggctaatggagttaaaaaggcagtg 453
           ||||||||||||||||||||||| || ||| | |||||||||||||||||||| ||||||
Sbjct: 373 agctgctctgagtctgttgaacgtgcactccttatggctaatggagttaaaaaagcagtg 432

                                                                       
Query: 454 gtaggtctagctcttgaagaagcaaaaattcactttgatccaaaccttactgatacagat 513
           || ||||||||||| |||||||| ||  | || |||||||||||||| |||||||| |||
Sbjct: 433 gttggtctagctctagaagaagcgaaggtccattttgatccaaacctcactgatacggat 492

                                                                       
Query: 514 cacattgtagaagctgtagaagatgctgggtttggggctgagattatcagctctgggaat 573
           || ||  ||||||| |||||||||||||| |||||||||||| | || || |||||| ||
Sbjct: 493 catatcatagaagcagtagaagatgctggctttggggctgagctcattagttctgggcat 552

                                                 
Query: 574 gatctgaataaagcgcatctaaaacttgaaggaattaa 611
           ||| |||| ||||  |||||||| |||||||| |||||
Sbjct: 553 gatgtgaacaaagtacatctaaagcttgaaggtattaa 590