Jatropha Genome Database

JcCB0495181.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0495181.10 - phase: 0 
         (573 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m008857 transketolase, putative                                 347   5e-95
31825.m000041 transketolase, putative                                  72   4e-12

>30174.m008857 transketolase, putative
          Length = 2259

 Score =  347 bits (175), Expect = 5e-95
 Identities = 436/523 (83%), Gaps = 15/523 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcttctacttcatctctaactctatcacaggcccttttggctcgggccgtctcttac 60
           ||||| |||||||||||||||||||||||||| || || |||||||| ||| | ||| ||
Sbjct: 1   atggcgtctacttcatctctaactctatcacaagctctcttggctcgagccatttctcac 60

                                                                       
Query: 61  tatggctcttctcagtcctccgaccaccaccgcctctctctttctacaccttcccttcct 120
            ||| |||  | || ||||| ||||      | |||||||| || ||||||||||| |||
Sbjct: 61  catgtctcaacccaatcctctgacc------gtctctctctctccacaccttccctccct 114

                                                                       
Query: 121 gccttttctggtctcaagtctacctcttcctcaatcccacgcgctactgcctcccgccgc 180
           |||||||| || |||||||| |||||||| || ||||||||||| ||  |||||||||||
Sbjct: 115 gccttttccggactcaagtccacctcttcttccatcccacgcgccacctcctcccgccgc 174

                                                                       
Query: 181 agtagccgcc---gcagcatttccaac------cgccagcaaacccaaatccgggcgtct 231
           ||| |||||    |||||||  ||| |      ||||  || |||| || | | ||  ||
Sbjct: 175 agtcgccgcaacagcagcatccccaccgctcgccgcctccagaccccaaccagagcagct 234

                                                                       
Query: 232 gtggttgaaaccgttgacgctaccactgagacttcattggttgagaaatctgtcaataca 291
           |  ||||||||  | || |  || ||||| ||||||||||||||||||||||||||||||
Sbjct: 235 gccgttgaaactctggatgtcactactgatacttcattggttgagaaatctgtcaataca 294

                                                                       
Query: 292 attagatttcttgctattgatgctgtggagaaggccaattcgggtcaccccggtttgcct 351
           |||||||||||||||||||||||||| || ||||||||||| ||||| |||||| | || 
Sbjct: 295 attagatttcttgctattgatgctgttgaaaaggccaattcaggtcatcccggtctaccc 354

                                                                       
Query: 352 atgggatgtgctcctatgggtcatattttgtacgatgaagtaatgaaatataacccaaag 411
           ||||| |||||||| |||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 355 atgggttgtgctcccatgggtcatattttgtacgatgaaataatgaaatataatccaaag 414

                                                                       
Query: 412 aatccttattggttcaatcgcgatcggttcgtcttgtctgccggtcacggctgtatgtta 471
           |||||||||||||||||||| ||||| || || |||||||| ||||| || |||||||| 
Sbjct: 415 aatccttattggttcaatcgtgatcgctttgtattgtctgctggtcatggatgtatgttg 474

                                                      
Query: 472 cagtatgctttgcttcacctcgctggttatgatagtgtcaagg 514
           ||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 475 cagtacgctttgcttcaccttgctggttatgatagtgtcaagg 517


>31825.m000041 transketolase, putative
          Length = 354

 Score = 71.9 bits (36), Expect = 4e-12
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                   
Query: 301 cttgctattgatgctgtggagaaggccaattcgggtcaccccggtttgcctatggg 356
           ||||| || |||||||| |||||||||||||| ||||||||||||||||| |||||
Sbjct: 22  cttgccatggatgctgtcgagaaggccaattccggtcaccccggtttgccgatggg 77