Jatropha Genome Database

JcCB0492761.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0492761.20 - phase: 0 /partial
         (165 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008623 Zeta-carotene desaturase, chloroplast precursor, p...   147   2e-35

>30128.m008623 Zeta-carotene desaturase, chloroplast precursor,
            putative
          Length = 2895

 Score =  147 bits (74), Expect = 2e-35
 Identities = 140/162 (86%)
 Strand = Plus / Plus

                                                                        
Query: 1    gattacatagacagcatggaaggagcaactttatctggtagacaggcttcagcatacata 60
            |||||||||||||||||||| || ||||||||||| || ||||||||||||||||| |||
Sbjct: 1600 gattacatagacagcatggagggggcaactttatccggaagacaggcttcagcatatata 1659

                                                                        
Query: 61   tgtgatgctggtgaagatttggtagcattgaggaagaagcttgctgccatagaatctcca 120
            ||||| |||||||||||  | || ||||||| |||||||||||||||| | |||||||||
Sbjct: 1660 tgtgaagctggtgaagaactagttgcattgaagaagaagcttgctgccgttgaatctcca 1719

                                                      
Query: 121  gaaatcgggccgtcttctccagtcactgatgagctgagtctt 162
            |||  |   | |||| || ||||| |||||||||||||||||
Sbjct: 1720 gaatgcccacagtctgctgcagtcgctgatgagctgagtctt 1761