Jatropha Genome Database

JcCB0487491.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0487491.10 + phase: 0 
         (609 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30066.m000716 mannose-6-phosphate isomerase, putative                 268   4e-71

>30066.m000716 mannose-6-phosphate isomerase, putative
          Length = 1341

 Score =  268 bits (135), Expect = 4e-71
 Identities = 364/439 (82%), Gaps = 6/439 (1%)
 Strand = Plus / Plus

                                                                       
Query: 119 tgaaatgctcagttcagaattacgattggggcattattggcaataattctcaggtggcaa 178
           ||||||| ||||| || || || |||||||||||| ||||||| ||||||||||||||||
Sbjct: 92  tgaaatgttcagtacacaactatgattggggcattgttggcaaaaattctcaggtggcaa 151

                                                                       
Query: 179 ggcttttcgctcttaattctggctctgatatttgtccaaacaagccttatgcggagttct 238
           |||| ||| |||| ||||||||||||||||||   |||   ||||||||||| |||||||
Sbjct: 152 ggctcttctctctcaattctggctctgatattgacccaggtaagccttatgccgagttct 211

                                                                       
Query: 239 ggattggaactcatgaatccggcccatcatttttggatcatggtaatgcaggattcaggt 298
           |||||||||||||| |||| || || || ||| ||||||||||||||| |  ||  |   
Sbjct: 212 ggattggaactcataaatctggtccttcttttgtggatcatggtaatgga-aatgga--- 267

                                                                       
Query: 299 cgtcgttgagtttaaaatcttggatcttggataatcccattttggttcttggagaccgag 358
             || ||||||||||||   ||||||||||| ||||||  |   ||||||||||||   |
Sbjct: 268 --tcattgagtttaaaaaaatggatcttggagaatccctataaagttcttggagacaagg 325

                                                                       
Query: 359 ttttcgagaaatggggcggtgatcttcctttcttgttgaaggtactttctgtagagaaag 418
           || |  |||||||||| ||||||||||||||||| || |||||| ||||||||| |||||
Sbjct: 326 ttatgaagaaatggggtggtgatcttcctttcttattcaaggtaatttctgtagggaaag 385

                                                                       
Query: 419 cattatctatacaagcacatccagataaggaattggcaagggctttgcatatctctcaac 478
           | || ||||||||||| |||||||||||||||||||||| |||  |||| |   |||| |
Sbjct: 386 ccttgtctatacaagcccatccagataaggaattggcaaaggccctgcacaaggctcagc 445

                                                                       
Query: 479 ccaatgtttataaggacggtaatcacaagcctgaaatggcattggcacttaccgaatttg 538
           | | | |||||||||| | ||||||||||||||| |||||||| |||||||| |||||||
Sbjct: 446 caagtatttataaggatgataatcacaagcctgagatggcattagcacttacagaatttg 505

                              
Query: 539 aggctctttgtgggtttat 557
           |||||||||| || |||||
Sbjct: 506 aggctctttgcggatttat 524