Jatropha Genome Database
- JcCB0478801.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0478801.10 - phase: 0 /partial
(936 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29822.m003474 conserved hypothetical protein 720 0.0
30180.m001064 Auxin efflux carrier component, putative 86 4e-16
29651.m000296 hypothetical protein 56 4e-07
29816.m000677 Auxin efflux carrier component, putative 52 6e-06
>29822.m003474 conserved hypothetical protein
Length = 942
Score = 720 bits (363), Expect = 0.0
Identities = 760/892 (85%), Gaps = 9/892 (1%)
Strand = Plus / Plus
Query: 43 tccagcaacaatccctacaaaatgaatctgaaactcatattggctgactttcttcaaaaa 102
|||| |||||| |||||||||||||| || ||||| ||||| ||||||||||||||||||
Sbjct: 49 tccaacaacaacccctacaaaatgaacctcaaacttatatttgctgactttcttcaaaaa 108
Query: 103 atattggctgttttagtactaacagcaatcactaaaatcagctccagaggaaggctaaat 162
|||| |||| ||||||||| ||||||||| || |||||||| ||||||||| | |||
Sbjct: 109 ctattagctgctttagtactcttagcaatcaccaagatcagctctagaggaaggttgaat 168
Query: 163 tgggtcattactggtctctctctttcaacattgcccaatactttgatcctgggaattcca 222
||| |||| |||||||||||||| ||||||||||| || |||||||| ||||||| |||
Sbjct: 169 tggatcatcactggtctctctctgtcaacattgcctaacactttgatattgggaatccca 228
Query: 223 cttttgaaggctatgtatggggaagaagccgactcgctcctctcccagattattgtctta 282
|||||||||||||||||||||| ||||| || | || || ||||| ||||||||
Sbjct: 229 cttttgaaggctatgtatggggctgaagcagaggcactt---tcacagatagttgtctta 285
Query: 283 caaagcttagtttggtataatttgttattgtttctttttgagctcaatgccacctatgca 342
|||||||||||||||||||||||||| |||| || |||||||| ||||| |||||||||
Sbjct: 286 caaagcttagtttggtataatttgttgctgttcctgtttgagctaaatgcaacctatgca 345
Query: 343 gccccagtgacaccatcttcagaaaccacaggtga------ggcccctgaagaggcacaa 396
|| |||||| |||||||||||||||| ||||| || ||||||| |||| ||||||
Sbjct: 346 gctccagtggcaccatcttcagaaactacaggagaccaggaggcccctcaagaagcacaa 405
Query: 397 ttaaaagagggagaagatgaaactcacactagaccaacaaggagagtcaagaccatgctc 456
| ||| |||| |||||||||||| | || || |||||||||||| || |||||| ||
Sbjct: 406 tcaaaggaggaagaagatgaaacaaatacaagtacaacaaggagagcaaaaaccatggtc 465
Query: 457 attctcttgacagtggggaagaagctattgagaaatccgaattttcatgctacttcgttg 516
|||||||||||||||||||||||||| |||||||||| ||||| ||||| ||| | ||
Sbjct: 466 attctcttgacagtggggaagaagctgctgagaaatcccaatttccatgcaactctgctg 525
Query: 517 ggtctcatttgggcaagcatacattttaggtgggaagtgaaattaccagacgttgttgat 576
||||| || ||||||||| |||| || |||||||| || ||| | |||||| ||||||||
Sbjct: 526 ggtctgatatgggcaagcgtacacttcaggtgggatgtaaaactgccagacattgttgat 585
Query: 577 caatctatacggattttatcaacaggagggcttggtatggcaatgttcagcttaggttta 636
||||||||||||| || |||||||||||||| ||||||||||||||||||||||| |
Sbjct: 586 aaatctatacggatattgtcaacaggagggctcggtatggcaatgttcagcttaggcctg 645
Query: 637 tttatggcatctcggaccagtataatagcatgtggcattcgaatggcaatagtatctatg 696
|| |||||||| || ||| |||||||||||||||| ||||||||||| | ||||||||
Sbjct: 646 ttcatggcatcacgccccaatataatagcatgtggcgttcgaatggcagtgctatctatg 705
Query: 697 gcaatcaagtttatttcagggcctgccctaatggcagtttcttcctttgcccttgttcta 756
|||| || || |||||||| ||||| ||||||||||| || || |||| || |
Sbjct: 706 tcaatgaaattcatttcaggccctgctataatggcagttgctgcccttgcggttagagca 765
Query: 757 aagggcacagtgtttaaagtggcaattgtgcaggcagctctacctcaagggattgttccg 816
| |||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 766 aggggcacagtgttcaaagtggccattgtgcaggcagctctacctcaggggattgttcca 825
Query: 817 tttgtctttgctaaagaatataatattcatccagacatattaagcacaggggtaattttt 876
|||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||
Sbjct: 826 tttgtctttgctaaagaatacaacattcatccagacatattgagcacaggggtaattttt 885
Query: 877 ggcatgcttaatgcattgccaatagcattggcctactactccctattagcat 928
|||||||| | |||| |||||||||| |||||||||||||||||||||||||
Sbjct: 886 ggcatgctcattgcactgccaatagctttggcctactactccctattagcat 937
>30180.m001064 Auxin efflux carrier component, putative
Length = 1842
Score = 85.7 bits (43), Expect = 4e-16
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 781 attgtgcaggcagctctacctcaagggattgttccgtttgtctttgctaaagaatataat 840
||||||||||||||||| || ||||||||||| || || |||||||| ||||||||||||
Sbjct: 1627 attgtgcaggcagctcttccacaagggattgtccccttcgtctttgcaaaagaatataat 1686
Query: 841 attcatccagacatattaagcac 863
||||||| ||||| || |||||
Sbjct: 1687 gttcatcctgacattttgagcac 1709
>29651.m000296 hypothetical protein
Length = 294
Score = 56.0 bits (28), Expect = 4e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 781 attgtgcaggcagctctacctcaagggattgttccgtttgtctttgctaaagaata 836
||||| |||||||||||||| ||||| ||||| || ||||||||||| || |||||
Sbjct: 142 attgtccaggcagctctaccacaaggaattgtcccctttgtctttgccaaggaata 197
>29816.m000677 Auxin efflux carrier component, putative
Length = 1941
Score = 52.0 bits (26), Expect = 6e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 781 attgtgcaggcagctctacctcaagggattgttccgtttgtctttgctaaagaatataat 840
||||| ||||| || ||||| ||||| |||||||| ||||| ||||||||||| || |||
Sbjct: 1789 attgttcaggctgcactaccacaaggaattgttccatttgtgtttgctaaagagtacaat 1848
Query: 841 attcatccag 850
| |||||||
Sbjct: 1849 gtccatccag 1858