Jatropha Genome Database
- JcCB0478521.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0478521.10 + phase: 0 /pseudo/partial
(848 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29468.m000030 lipoxygenase, putative 422 e-117
29929.m004699 lipoxygenase, putative 76 4e-13
29851.m002424 lipoxygenase, putative 60 2e-08
>29468.m000030 lipoxygenase, putative
Length = 1338
Score = 422 bits (213), Expect = e-117
Identities = 449/530 (84%)
Strand = Plus / Plus
Query: 295 atgtccgttcaagaggcgttggatgaaaataaactttttataatagattatcatgatgtt 354
||||| ||||||||||| |||| ||||| ||||| |||||| | || ||||| |||| |
Sbjct: 1 atgtctgttcaagaggccctggaggaaaacaaactgtttatagtggactatcacgatgct 60
Query: 355 tatctcccatttttggaccgaattaatgcccttgatggtagaaaagcttatgcaactcgt 414
|||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 61 tatctcccatttttagaccgcattaatgcccttgatggtagaaaagcatatgcaactcgt 120
Query: 415 accannnnnnnctcgagccctttagggactcttaagcccattgctatagagcttagcctc 474
|||| || || |||| | || || |||||||||||||||||||| ||||| ||
Sbjct: 121 accatatttttcttgacccctctcggtacacttaagcccattgctatagaacttagtctt 180
Query: 475 ccacaggcaggaccaaattcccgatcaaagcgagtagtaacccctccagttgacgcaact 534
|||| | | ||||| | ||||||||||||||| ||| || ||||||||||| |||||
Sbjct: 181 ccacctactgcaccaagtgcccgatcaaagcgagcagttacacctccagttgatgcaacc 240
Query: 535 accaactggatgtggcaacttgccaaggctcatgtttggtccaatgatgctggggttcat 594
|| | |||||| |||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 241 actacctggatatggcaacttgccaaggctcatgtttgttcaaatgatgctggggttcat 300
Query: 595 cagctagttaatcactggctacgcacacatgcttccttggagccatttatactatcagct 654
||||| ||||||||||||||||| || ||||| | | |||||||||||||||| ||||
Sbjct: 301 cagctggttaatcactggctacgtacgcatgcctgcctggagccatttatacttgcagca 360
Query: 655 cataggcaattgagtgcaatgcatcccatatttaagcttctggatccacacacgaggtac 714
||| | || ||||| ||||||| || || ||||||||| |||||||||||| ||| ||
Sbjct: 361 catcgacagttgagctcaatgcaccctatctttaagcttttggatccacacatgagatat 420
Query: 715 actctagagatcaatgcacttgcccgtcaaagcttaattaacggtgatggtgttattgaa 774
|| |||||||||||||| | ||||| ||||||||||| | | ||||||||||||||||
Sbjct: 421 accctagagatcaatgccttagcccgccaaagcttaatcagtgctgatggtgttattgaa 480
Query: 775 aactgcttcactcctggccgttactgcatggagattagtgctgctgcata 824
||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 481 aactgtttcacgcctggacgctactgcatggagattagtgctgctgcata 530
>29929.m004699 lipoxygenase, putative
Length = 2739
Score = 75.8 bits (38), Expect = 4e-13
Identities = 170/214 (79%)
Strand = Plus / Plus
Query: 539 actggatgtggcaacttgccaaggctcatgtttggtccaatgatgctggggttcatcagc 598
||||||| ||| |||| ||||| |||||||| || || |||||||||||||| ||||| |
Sbjct: 1640 actggatatggaaactagccaaagctcatgtctgctcaaatgatgctggggtccatcaac 1699
Query: 599 tagttaatcactggctacgcacacatgcttccttggagccatttatactatcagctcata 658
|||| ||||||||| | || ||||||||| | |||| || || ||| | || ||||||
Sbjct: 1700 tagtaaatcactggttgcggacacatgctgctatggaacctttcataattgcaactcata 1759
Query: 659 ggcaattgagtgcaatgcatcccatatttaagcttctggatccacacacgaggtacactc 718
| || | |||||||||||||| |||| ||||| || |||| || | | |||| || |
Sbjct: 1760 gacagctcagtgcaatgcatccaatatacaagctgcttcatcctcatatgcggtatacac 1819
Query: 719 tagagatcaatgcacttgcccgtcaaagcttaat 752
|||| || ||||||||||| || ||||| |||||
Sbjct: 1820 tagaaataaatgcacttgcacgacaaagtttaat 1853
>29851.m002424 lipoxygenase, putative
Length = 2361
Score = 60.0 bits (30), Expect = 2e-08
Identities = 108/134 (80%)
Strand = Plus / Plus
Query: 547 tggcaacttgccaaggctcatgtttggtccaatgatgctggggttcatcagctagttaat 606
|||||||| ||||| || |||||||| |||||||||||||| | |||||| || || ||
Sbjct: 1273 tggcaactagccaaagcccatgtttgctccaatgatgctggtgctcatcaattaattcat 1332
Query: 607 cactggctacgcacacatgcttccttggagccatttatactatcagctcataggcaattg 666
|||||| | ||| | ||||||| | ||||||| ||||| || |||| | |||||| |
Sbjct: 1333 cactggttgcgcgcccatgcttgcatggagccgtttattatagcagcaaacaggcaacta 1392
Query: 667 agtgcaatgcatcc 680
|| |||||||||||
Sbjct: 1393 agcgcaatgcatcc 1406