Jatropha Genome Database

JcCB0477181.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0477181.10 + phase: 0 /partial
         (378 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29929.m004707 conserved hypothetical protein                          383   e-106

>29929.m004707 conserved hypothetical protein
          Length = 1452

 Score =  383 bits (193), Expect = e-106
 Identities = 331/377 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    aatgagaagatcaccgatgatattcttttgcaattgactaatcgggctcaaggtaacttg 60
            |||||||| || || |||||| ||||||||||||| |||||| |||||||||||| ||||
Sbjct: 754  aatgagaaaattactgatgatgttcttttgcaattaactaatagggctcaaggtaccttg 813

                                                                        
Query: 61   caatgtttgagcctgattgagtgtccaaggattactgatgatgggttgaaacatgtcctt 120
            ||||||||||||||| ||||||||||| |||||||||||||||| |||||||| || |||
Sbjct: 814  caatgtttgagcctggttgagtgtccacggattactgatgatggattgaaacaggtgctt 873

                                                                        
Query: 121  gaaaataatccgaggctaaccaagctgagtgtgcctggatgtacaagactcagcattgag 180
            ||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 874  gaaaataatccaaggataaccaagctaagtgtgcctggatgtacaagactcagcattgag 933

                                                                        
Query: 181  ggcatcgtaactagcttaaaggcttttaggagtatgggtacacaaggggtgaagcattta 240
            || || ||| ||||||||||||| || | |  ||||||||||||  ||||||||||||||
Sbjct: 934  gggattgtatctagcttaaaggcattgaaggctatgggtacacagagggtgaagcattta 993

                                                                        
Query: 241  aggattggtggcctctatggagtgacacagaagcactttgaagaactgaagttcttgttg 300
            |||||||||||  | ||||||||||||||  |||| ||||||||||| ||||| || |||
Sbjct: 994  aggattggtgggatttatggagtgacacaagagcattttgaagaactaaagtttttattg 1053

                                                                        
Query: 301  ggctcagataaccatatgcagcagaatacctacaagccacattattatcacagagggaac 360
            ||| |||||   || |||||||||||| || |||||||||||| |||||||||||  |||
Sbjct: 1054 ggcacagatggtcacatgcagcagaatgcccacaagccacatttttatcacagagaaaac 1113

                             
Query: 361  ttttatttgtcatgtga 377
            || ||| ||||||||||
Sbjct: 1114 ttgtatctgtcatgtga 1130