Jatropha Genome Database

JcCB0473701.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0473701.10 + phase: 1 /partial
         (191 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29904.m002984 3-ketoacyl-CoA thiolase B, putative                     190   2e-48
30204.m001789 3-ketoacyl-CoA thiolase B, putative                      54   3e-07

>29904.m002984 3-ketoacyl-CoA thiolase B, putative
          Length = 1383

 Score =  190 bits (96), Expect = 2e-48
 Identities = 165/188 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtgcccgatgtgtagctactctattgcatgagatgaaacgccggggtagagattgtcgct 60
            |||||||||| |||||||||||| ||||||||||||| || || |||||||| ||||| |
Sbjct: 1190 gtgcccgatgcgtagctactctactgcatgagatgaagcgtcgtggtagagactgtcgtt 1249

                                                                        
Query: 61   tcggagtggtgtcaatgtgcataggcacaggaatgggagcagctgctgtttttgagaggg 120
            | ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 1250 ttggagtggtgtcaatgtgcataggcacaggaatgggagcagcagctgtttttgaaaggg 1309

                                                                        
Query: 121  gggatggctgtgatgagctgtgtaatgcccggaaagcagaaactgataagctgttatcaa 180
            | ||||  |||||||| || || ||||||||||||| ||||||   ||| ||| |||| |
Sbjct: 1310 gagatgcttgtgatgacctctgcaatgcccggaaagtagaaaccagtaatctgctatcta 1369

                    
Query: 181  aggatgct 188
            ||||||||
Sbjct: 1370 aggatgct 1377


>30204.m001789 3-ketoacyl-CoA thiolase B, putative
          Length = 1404

 Score = 54.0 bits (27), Expect = 3e-07
 Identities = 87/107 (81%)
 Strand = Plus / Plus

                                                                        
Query: 9    tgtgtagctactctattgcatgagatgaaacgccggggtagagattgtcgcttcggagtg 68
            ||||| || ||||| |||||||||||||| ||| | || |  || || ||||| ||||| 
Sbjct: 1219 tgtgttgcaactcttttgcatgagatgaagcgctgcgggaaggactgccgctttggagta 1278

                                                           
Query: 69   gtgtcaatgtgcataggcacaggaatgggagcagctgctgtttttga 115
             | |||||||||||||| ||||| ||||| || || |||||||||||
Sbjct: 1279 atctcaatgtgcataggtacaggtatgggggctgcagctgtttttga 1325