Jatropha Genome Database

JcCB0473001.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0473001.10 + phase: 1 /partial
         (278 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27574.m000219 protein phsophatase-2a, putative                        234   2e-61
29835.m000637 protein phsophatase-2a, putative                        107   3e-23
30147.m014035 protein phsophatase-2a, putative                         50   7e-06

>27574.m000219 protein phsophatase-2a, putative
          Length = 942

 Score =  234 bits (118), Expect = 2e-61
 Identities = 133/138 (96%)
 Strand = Plus / Plus

                                                                       
Query: 66  agagcattatgtgacaaggctaaggagatactaatgcaagaaagcaatgttcagcctgtg 125
           |||||||||| ||| || |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 97  agagcattatctgaaaaagctaaggagatacttatgcaagaaagcaatgttcagcctgtg 156

                                                                       
Query: 126 aaaagccctgtgacaatctgtggcgatattcatgggcagtttcatgatcttgcagaactt 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 aaaagccctgtgacaatctgtggcgatattcatgggcagtttcatgatcttgcagaactt 216

                             
Query: 186 tttcgtattggagggaag 203
           ||||| ||||||||||||
Sbjct: 217 tttcgaattggagggaag 234


>29835.m000637 protein phsophatase-2a, putative
          Length = 870

 Score =  107 bits (54), Expect = 3e-23
 Identities = 108/126 (85%)
 Strand = Plus / Plus

                                                                       
Query: 78  gacaaggctaaggagatactaatgcaagaaagcaatgttcagcctgtgaaaagccctgtg 137
           |||||||||||||||||  | ||| |||||||||||||||||||||| ||||| ||||| 
Sbjct: 109 gacaaggctaaggagattttgatggaagaaagcaatgttcagcctgttaaaagtcctgtt 168

                                                                       
Query: 138 acaatctgtggcgatattcatgggcagtttcatgatcttgcagaactttttcgtattgga 197
           ||||| ||||| ||||||||||| || || || ||||| || |||||||| || || |||
Sbjct: 169 acaatttgtggtgatattcatggtcaattccacgatctcgctgaacttttccggatcgga 228

                 
Query: 198 gggaag 203
           ||||||
Sbjct: 229 gggaag 234


>30147.m014035 protein phsophatase-2a, putative
          Length = 921

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 144 tgtggcgatattcatgggcagtttcatgatcttgcagaactttttcgtattgg 196
           ||||| |||||||| || ||||||||||||||||  || || |||||||||||
Sbjct: 154 tgtggggatattcacggacagtttcatgatcttgttgagctgtttcgtattgg 206