Jatropha Genome Database
- JcCB0470521.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0470521.10 + phase: 0
(261 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m014385 rac gtpase, putative 248 1e-65
29602.m000209 rac gtpase, putative 109 8e-24
28962.m000460 rac gtpase, putative 98 3e-20
29709.m001184 rac gtpase, putative 58 3e-08
29646.m001113 rac gtpase, putative 56 1e-07
>30170.m014385 rac gtpase, putative
Length = 594
Score = 248 bits (125), Expect = 1e-65
Identities = 206/233 (88%)
Strand = Plus / Plus
Query: 29 atcttcgggatgatgaccagttcttcattgaccatcctggtgcagcgcccattactactg 88
|||||||||| ||| | |||||||||||||||||||||||||||| ||| || |||||||
Sbjct: 362 atcttcgggaggataagcagttcttcattgaccatcctggtgcagtgcctataactactg 421
Query: 89 cgcagggagaggaactgagaaaacttattggagctcctgcctacattgagtgtagctcaa 148
| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 422 ctcagggagaggagttgagaaaacttattggagctcctgcctacatagagtgtagctcaa 481
Query: 149 aaacacagcagaatgtgaagggagtttttgatgcagccatcaaggtggttctgcagcccc 208
|| | || ||||| ||||||| |||||||||||| ||||||||||| ||||| |||||||
Sbjct: 482 aatcgcaacagaacgtgaaggcagtttttgatgcggccatcaaggtagttctccagcccc 541
Query: 209 caaagaaaaataagaagaagaaaaaggggcaaacttcttgctccatattgtga 261
|||| ||| ||||||||||| ||||| |||| |||||||||||||||||
Sbjct: 542 caaaacaaaggaagaagaagaagaagggacaaaaggcttgctccatattgtga 594
>29602.m000209 rac gtpase, putative
Length = 597
Score = 109 bits (55), Expect = 8e-24
Identities = 130/155 (83%)
Strand = Plus / Plus
Query: 58 gaccatcctggtgcagcgcccattactactgcgcagggagaggaactgagaaaacttatt 117
||||| |||||||||| ||||||||| || || ||||| || |||||||| || || |||
Sbjct: 391 gaccaccctggtgcagtgcccattaccacagctcagggggaagaactgaggaagctaatt 450
Query: 118 ggagctcctgcctacattgagtgtagctcaaaaacacagcagaatgtgaagggagttttt 177
|| ||||||| |||||||| ||||| |||||||| ||||||||||| || | || |||
Sbjct: 451 ggggctcctgtttacattgaatgtagttcaaaaactcagcagaatgtcaaagctgtcttt 510
Query: 178 gatgcagccatcaaggtggttctgcagcccccaaa 212
||||||||||| || |||||||| ||||| |||||
Sbjct: 511 gatgcagccattaaagtggttctccagccaccaaa 545
>28962.m000460 rac gtpase, putative
Length = 594
Score = 97.6 bits (49), Expect = 3e-20
Identities = 118/141 (83%)
Strand = Plus / Plus
Query: 29 atcttcgggatgatgaccagttcttcattgaccatcctggtgcagcgcccattactactg 88
||||||||||||| | || ||||| | ||||| |||||||| | ||| |||||||| |
Sbjct: 362 atcttcgggatgacaagcaattctttgtagaccaccctggtgctgtgcctattactacag 421
Query: 89 cgcagggagaggaactgagaaaacttattggagctcctgcctacattgagtgtagctcaa 148
| ||||||||||||||||| || || ||||| || ||||| |||||||| || || || |
Sbjct: 422 ctcagggagaggaactgaggaagctgattggtgcgcctgcttacattgaatgcagttcta 481
Query: 149 aaacacagcagaatgtgaagg 169
|||||||||||||||||||||
Sbjct: 482 aaacacagcagaatgtgaagg 502
>29709.m001184 rac gtpase, putative
Length = 609
Score = 58.0 bits (29), Expect = 3e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 142 agctcaaaaacacagcagaatgtgaagggagtttttgatgcagccatcaaggtggttctg 201
||||| |||||||||||||||||||||| || |||||||| || ||||||| |||||
Sbjct: 493 agctctaaaacacagcagaatgtgaaggccgtgtttgatgctgcaatcaaggcagttctc 552
Query: 202 cagcccccaaaga 214
|| || |||||||
Sbjct: 553 caacctccaaaga 565
>29646.m001113 rac gtpase, putative
Length = 594
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 139 tgtagctcaaaaacacagcagaatgtgaagggagtttttgatgcagccatcaaggtggtt 198
||||| ||||| || || ||||||||||| | ||| ||||||||||| |||||||| |||
Sbjct: 472 tgtagttcaaagactcaacagaatgtgaaagcagtgtttgatgcagcaatcaaggttgtt 531
Query: 199 ctgcagcc 206
|||||||
Sbjct: 532 ttgcagcc 539