Jatropha Genome Database

JcCB0469081.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0469081.10 + phase: 0 /pseudo/partial
         (621 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29739.m003743 Adipocyte plasma membrane-associated protein, puta...   143   1e-33

>29739.m003743 Adipocyte plasma membrane-associated protein, putative
          Length = 1071

 Score =  143 bits (72), Expect = 1e-33
 Identities = 222/272 (81%)
 Strand = Plus / Plus

                                                                        
Query: 286  cttcctggtggacctgataacatcaatcttgctcctgacggatctttctggattggtttg 345
            ||||| |||| ||||||||| || ||||| || || ||||| |||||||||||| |||||
Sbjct: 733  cttcccggtgcacctgataatataaatctggcaccggacggctctttctggatttgtttg 792

                                                                        
Query: 346  ctacagttgacatcggattggctgaaatttgtgcacacctcaaagttatctaaacacttg 405
            || ||| || |  ||||| | ||| ||||||||||||||||||||  ||| ||||| |||
Sbjct: 793  cttcaggtggcggcggatggactggaatttgtgcacacctcaaaggcatccaaacatttg 852

                                                                        
Query: 406  gtagcatcatttccgaaattgattgaactagtaactggactccgcaagaaagcaatggtg 465
            ||||| || ||||||||| |||||||||| || | |||| ||   ||||| |||||||||
Sbjct: 853  gtagcctcctttccgaaactgattgaactggtcaatggagtcgaaaagaatgcaatggtg 912

                                                                        
Query: 466  gtgaatgtggcagctgatggcaggattatcaggatgttcgatgatcctgtagggaaagta 525
            || ||||||||||||||||||| ||| | ||| | ||| ||||| ||||  || ||||| 
Sbjct: 913  gtaaatgtggcagctgatggcaagataaccagaaagtttgatgaccctgatggaaaagtt 972

                                            
Query: 526  atgtcatttgtgacttcagctttcgagttcga 557
             |||| || || ||||||||| | ||||||||
Sbjct: 973  gtgtctttcgtaacttcagctgtggagttcga 1004



 Score =  141 bits (71), Expect = 6e-33
 Identities = 231/283 (81%), Gaps = 1/283 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggagtaactagttcttgcctcagagattaacgggtccaagataaggtttgcagatgacgc 60
           |||||||| ||||||||| |||||| |||| ||||| || |||| |||||||||||| ||
Sbjct: 385 ggagtaac-agttcttgcatcagaggttaatgggtctaaaataaagtttgcagatgatgc 443

                                                                       
Query: 61  gattgaaacttcagatggtaatatctatttcagcgtcgcaagcactaaatttgggttcca 120
           ||| ||| |||| |||||||| |||||||| || ||  ||||||| ||||||||||| ||
Sbjct: 444 gatcgaatcttccgatggtaacatctattttagtgttccaagcaccaaatttgggttgca 503

                                                                       
Query: 121 caattggtatctggacctgcttgaggccagaccaaatggacaattgctcaagtatgatcc 180
           ||| |||||||||||  | || ||||| |||||  |||| || |||||||||||||||||
Sbjct: 504 caactggtatctggatgttctcgaggcaagacctcatgggcagttgctcaagtatgatcc 563

                                                                       
Query: 181 ttcgataaaggagacctcaattcttcttgataatctttatttccctaatggtgttgctct 240
             |   |||  |||||||| |||| ||||||  | | |  ||||||||||| ||||||||
Sbjct: 564 cacatcaaatcagacctcagttctgcttgatggtttgtgcttccctaatggcgttgctct 623

                                                      
Query: 241 ttcaaaggaagaagattatctgatcttttgtgaaacttggaaa 283
            |||  |||||||||||||||  |||| || |||| |||||||
Sbjct: 624 ctcatgggaagaagattatctagtcttctgcgaaagttggaaa 666