Jatropha Genome Database
- JcCB0467821.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0467821.10 - phase: 0 /partial
(1187 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29728.m000797 Carbamoyl-phosphate synthase small chain, putative 1108 0.0
>29728.m000797 Carbamoyl-phosphate synthase small chain, putative
Length = 1257
Score = 1108 bits (559), Expect = 0.0
Identities = 867/969 (89%), Gaps = 3/969 (0%)
Strand = Plus / Plus
Query: 92 ggtatcaagaaattcttacagatcctagttatgctggccaatttgttttgatgacaaatc 151
||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||
Sbjct: 278 ggtatcaagaaattcttacagatcctagttatgctgggcagtttgtcctgatgacaaatc 337
Query: 152 cacatattggaaacactggagtaaattttgatgatgaagagtcaaggcaatgtttccttg 211
| ||||| || |||||||| |||||||||| ||||||||| |||| |||||||| ||||
Sbjct: 338 ctcatatagggaacactggtgtaaattttggtgatgaagaatcaacacaatgttttcttg 397
Query: 212 ctggtttggtgatcaggagcttaagtatcagtacttcaaattggagatgtaccaaaacac 271
||||| |||| |||||||| |||||||| ||||||||||||||||||| ||||||||||
Sbjct: 398 ctggtctggtaatcaggagtttaagtattggtacttcaaattggagatgcaccaaaacac 457
Query: 272 ttggtgattatttagcagagcggaacatcatggggatatatgatgttgatacacgtgcaa 331
|||| |||||||| ||||| | ||||||||||| |||||||||||||| ||||||||||
Sbjct: 458 ttggagattatttggcagaaagaaacatcatgggaatatatgatgttgacacacgtgcaa 517
Query: 332 tcactcgcagattgagacaagatggaagccttattggtgtattgagcacagaagattcca 391
||||||| |||||||| |||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 518 tcactcgtagattgagggaagatggaagccttattggtgtcctgagcacggaagattcca 577
Query: 392 agacagatgaggaacttctgcaaatgtctaaatcatgggacattgttggtgttgatttga 451
|||||||||||||||||||| | |||||| |||||||| || || ||||||||||| |
Sbjct: 578 agacagatgaggaacttctgaagatgtctcgttcatgggatatcgtaggtgttgatttaa 637
Query: 452 taagtgatgtctcttgcacatccccttatgaatgggttgatcaaacaaacccagaatggg 511
|||||||||| || ||||| ||||||| |||||||||||| ||||||| | |||||||
Sbjct: 638 taagtgatgtttcatgcactgccccttacaaatgggttgatccaacaaactctgaatggg 697
Query: 512 attttaactctgaaggaagtg---gagaggtctaccatgttgttgcgtacgattttggga 568
|||||||||| | || || | ||||||| | |||||||||||| || ||||||||||
Sbjct: 698 attttaactcgaatgggagagaaggagaggttttccatgttgttgcatatgattttggga 757
Query: 569 tcaagcataatatactgaggcgcttagcctcttatggctgtaaaatcactgtggttcctt 628
||||||| ||||| ||||||||| |||| |||||||||||||||||||| |||||||| |
Sbjct: 758 tcaagcacaatattctgaggcgcctagcatcttatggctgtaaaatcaccgtggttccct 817
Query: 629 caaagtggcctgccctagaaactctaaagttgaagccagatggagttcttttcagcaatg 688
| || ||||| || |||||||||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 818 ctaaatggccagcattagaaactctgaagttgaagcccgatggagttcttttcagtaatg 877
Query: 689 gccctggagacccatctgcagttccttatgctgttcaaacagtcaaggaattactaggga 748
|||||||||| |||||||||||||||||||||||| ||||||| || ||||||||||| |
Sbjct: 878 gccctggagatccatctgcagttccttatgctgttgaaacagtaaaagaattactaggaa 937
Query: 749 aggttcctgtttttggaatttgcatgggccatcaattgcttggtcaggcattgggtggta 808
|||||||||||||||||||||||||||| ||||| |||||||| || |||||||||||||
Sbjct: 938 aggttcctgtttttggaatttgcatgggtcatcagttgcttggccaagcattgggtggta 997
Query: 809 aaacatttaaaatgaagtttggccaccatggaggaaatcatccagttcgtaatgttcggc 868
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 998 aaacctttaaaatgaagtttggccaccatggaggaaatcatccagttcgtaatgttcggc 1057
Query: 869 aaaaccgtgttgagattagtgctcagaatcacaactacgcagttgacccagcatcacttc 928
| ||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 1058 acaaccgcgttgagattagtgcccagaatcacaactatgcagttgacccagcatcacttc 1117
Query: 929 ctgagggtgtggaagtgactcatatcaatctgaatgatggaagctgtgctggtcttgctt 988
|||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 1118 ctgaaggtgtggaagtgactcacattaatctgaatgatggaagctgtgctggtcttgctt 1177
Query: 989 atccggcactaaacatcatgtcacttcaataccaccctgaggcatcccctggccctcacg 1048
|||| | || ||||||||||| |||||||||||||| ||||| ||||| |||||||| |
Sbjct: 1178 atcctgtgctgaacatcatgtcgcttcaataccaccccgaggcttccccaggccctcatg 1237
Query: 1049 attcagata 1057
|||||||||
Sbjct: 1238 attcagata 1246