Jatropha Genome Database

JcCB0467621.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0467621.10 - phase: 1 /TE/pseudo/partial
         (359 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29670.m000148 kinesin light chain, putative                           204   3e-52

>29670.m000148 kinesin light chain, putative
          Length = 1512

 Score =  204 bits (103), Expect = 3e-52
 Identities = 178/203 (87%)
 Strand = Plus / Plus

                                                                       
Query: 92  tggattacgcaaaattgaggatggttctgtaatttcaaatgagcatacttctaaatggag 151
           ||||||||||||||||||||||||||||||||| || |||   |||||||||||||||||
Sbjct: 141 tggattacgcaaaattgaggatggttctgtaatatccaatatacatacttctaaatggag 200

                                                                       
Query: 152 aatatttactgataacgggagggaatactttgtgcagggaaaattggaacaagctgaaaa 211
           ||||||||| ||||| || |||| ||||||  | ||||||||||||||  ||||||||||
Sbjct: 201 aatatttacagataatggcagggcatacttcctccagggaaaattggatgaagctgaaaa 260

                                                                       
Query: 212 gttcttcttttctgccctagaagaagctaaaaagggttttggtgatagggatcctcatgt 271
           ||||||| ||||||| |||||||||||||| || ||||||||  || | || || |||||
Sbjct: 261 gttcttcctttctgctctagaagaagctaagaaaggttttgggaatcgagagccccatgt 320

                                  
Query: 272 tgcttctgcctgcaacaatttgg 294
           ||||||||| |||||||||||||
Sbjct: 321 tgcttctgcttgcaacaatttgg 343