Jatropha Genome Database

JcCB0465191.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0465191.10 - phase: 2 /pseudo/partial
         (457 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m013816 organic anion transporter, putative                     258   3e-68
30162.m001266 organic anion transporter, putative                      98   6e-20

>30170.m013816 organic anion transporter, putative
          Length = 1032

 Score =  258 bits (130), Expect = 3e-68
 Identities = 270/317 (85%), Gaps = 6/317 (1%)
 Strand = Plus / Plus

                                                                        
Query: 113  ctttcatgttccctagctgtattctgcaatgtgagccagtacctatgtattggaagattc 172
            ||||||||||  ||||| || ||||| ||| |||| ||||| || |||||||||||||||
Sbjct: 691  ctttcatgtttgctagcagtcttctgtaatatgagtcagtatctgtgtattggaagattc 750

                                                                        
Query: 173  tcagcagtttccttccaggttttaggtcatatgaaaacagtttgtgttctcacactggga 232
            ||||||  ||||||||||||||||||||| |||||||| || |||||||||||| |||| 
Sbjct: 751  tcagcaacttccttccaggttttaggtcacatgaaaacggtgtgtgttctcacattgggc 810

                                                                        
Query: 233  tggctgctctttgattcggagttgactttcaaaaacataatgggaatggttattgcaata 292
            ||||| || || ||||| || ||||| ||||| ||||||||||||||||| |||||  ||
Sbjct: 811  tggcttctgttcgattctgaattgacattcaagaacataatgggaatggtaattgctgta 870

                                                                        
Query: 293  gccggcatggttgtttatagttgggctatggaggctgaaaagagtgcaaatgccaaggcc 352
            || || |||||||||||||| |||||| | ||||||||||||||      ||||||||||
Sbjct: 871  gctggaatggttgtttatagctgggctgtagaggctgaaaagag------tgccaaggcc 924

                                                                        
Query: 353  acaccccatatgaagaacagcctgacagaagaggaaatcagacttctgaaggagggagtg 412
              | | |||  ||||||||||||||| ||||||||||||||||||||||| |||||| ||
Sbjct: 925  ttagctcatgcgaagaacagcctgacggaagaggaaatcagacttctgaaagagggaatg 984

                             
Query: 413  gaaagcactcccgtgaa 429
            ||||||| |||||||||
Sbjct: 985  gaaagcagtcccgtgaa 1001


>30162.m001266 organic anion transporter, putative
          Length = 1035

 Score = 97.6 bits (49), Expect = 6e-20
 Identities = 121/145 (83%)
 Strand = Plus / Plus

                                                                       
Query: 128 gctgtattctgcaatgtgagccagtacctatgtattggaagattctcagcagtttccttc 187
           |||||||||||||||||||| ||||| || ||||||||| | | ||||||||| || |||
Sbjct: 700 gctgtattctgcaatgtgagtcagtatctctgtattggacgttactcagcagtatctttc 759

                                                                       
Query: 188 caggttttaggtcatatgaaaacagtttgtgttctcacactgggatggctgctctttgat 247
           |||||||| || || |||||||| || ||||| || ||  |||| ||| | |||||||||
Sbjct: 760 caggttttggggcacatgaaaactgtgtgtgtccttaccttgggttggatactctttgat 819

                                    
Query: 248 tcggagttgactttcaaaaacataa 272
           || ||||||||  | ||||||||||
Sbjct: 820 tcagagttgacagtaaaaaacataa 844