Jatropha Genome Database

JcCB0461591.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0461591.10 + phase: 2 /partial
         (331 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29805.m001503 sensory transduction histidine kinase, putative         165   2e-40

>29805.m001503 sensory transduction histidine kinase, putative
          Length = 2289

 Score =  165 bits (83), Expect = 2e-40
 Identities = 258/321 (80%), Gaps = 24/321 (7%)
 Strand = Plus / Plus

                                                                        
Query: 1    acattgtgggtcatccaatatgttgggtgggcctgttgaaggtaatggtggcaattatag 60
            ||||||||||||||| ||| |||||||||| ||| ||||||||||||| || ||||| ||
Sbjct: 1875 acattgtgggtcatcaaatgtgttgggtggacctcttgaaggtaatggcggtaattacag 1934

                                                                        
Query: 61   catcaatggaagtgcttcaggtagcaaccatgggagcaa------------tggacaaaa 108
             ||||| |||||||| |||||||| || ||||| || ||            |||||||||
Sbjct: 1935 tatcaacggaagtgcctcaggtagtaatcatggcagtaaccatgtaagtaatggacaaaa 1994

                                                                        
Query: 109  tgggagcagcactgccgttaatgctggaggtactaacatggaaagtgataatgggattgc 168
            ||| || |||||||| ||||||||||| || |||||  | |||||||| ||||| || | 
Sbjct: 1995 tggcagtagcactgcagttaatgctgggggaactaatgtagaaagtgacaatggcatagg 2054

                                                                        
Query: 169  tggtaaaactggaagtggtgatggtagtgggagtgggagtgggggcggaaacagaataga 228
            ||| |||| ||||||||| ||||||||||||            |  |||||||||  |||
Sbjct: 2055 tgggaaaagtggaagtggggatggtagtggg------------gaaggaaacagaggaga 2102

                                                                        
Query: 229  tcaaaacaagttctctcaaagagaagctgccctgaccaaatttcggcagaagaggaagga 288
            |||||||||||| ||||||||||||| |||| ||||||| |||||||||||||| |||||
Sbjct: 2103 tcaaaacaagttttctcaaagagaagttgccttgaccaagtttcggcagaagagaaagga 2162

                                 
Query: 289  gagatgcttccggaaaaaggt 309
             ||||||||||||||||||||
Sbjct: 2163 aagatgcttccggaaaaaggt 2183