Jatropha Genome Database

JcCB0461271.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0461271.10 + phase: 0 /partial
         (410 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m014310 conserved hypothetical protein                          167   6e-41

>30147.m014310 conserved hypothetical protein
          Length = 1173

 Score =  167 bits (84), Expect = 6e-41
 Identities = 258/316 (81%)
 Strand = Plus / Plus

                                                                       
Query: 72  caaacccttaaagttttcaataaaacctccgccgccagactttgatttcagatcggagat 131
           ||||||||||||| |||||||||| ||||| || || ||||||||||||||||| || ||
Sbjct: 72  caaacccttaaaggtttcaataaagcctccaccacctgactttgatttcagatcagaaat 131

                                                                       
Query: 132 attgcaacaatccagaaccacaattgccaaatcctacccacaattgctagacttggccga 191
           ||||||| |||||||||| ||||||||||||  | ||||  |  |||| |||||||||||
Sbjct: 132 attgcaagaatccagaactacaattgccaaaaaccaccctgacctgcttgacttggccga 191

                                                                       
Query: 192 tacaggtaacttagtagttatagagaagcaacttttcggtcctgtaccggcctggagaac 251
           | |||| || ||| |  | || ||||||| ||||||||| || |||||||| ||||| ||
Sbjct: 192 ttcagggaatttaattttaattgagaagcgacttttcggaccagtaccggcttggaggac 251

                                                                       
Query: 252 cgagtttgttgaaccagacgcaatttggttagtcggcaccacccatatttgcagtgaatc 311
            |||||||| ||||| || || || ||||| || |||||||  |||||||  | ||||||
Sbjct: 252 agagtttgtcgaacctgaggctatatggttggttggcaccagtcatatttcgactgaatc 311

                                                                       
Query: 312 cgccgcagaagtggagcgcgttgtgcgggccgtgaggcctgacaacgtcgtagttgagct 371
            ||  || |||||||||| || ||||| || || | ||||||||| || ||||||||| |
Sbjct: 312 agctacacaagtggagcgagtggtgcgcgctgtcaagcctgacaatgtagtagttgagtt 371

                           
Query: 372 gtgtaaaagcaggcaa 387
            |||| ||||||||||
Sbjct: 372 atgtagaagcaggcaa 387