Jatropha Genome Database
- JcCB0461221.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0461221.10 + phase: 2 /partial
(811 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30131.m006931 glyceraldehyde 3-phosphate dehydrogenase, putative 658 0.0
37452.m000013 glyceraldehyde 3-phosphate dehydrogenase, putative 56 3e-07
30170.m013796 glyceraldehyde 3-phosphate dehydrogenase, putative 56 3e-07
>30131.m006931 glyceraldehyde 3-phosphate dehydrogenase, putative
Length = 1215
Score = 658 bits (332), Expect = 0.0
Identities = 684/806 (84%)
Strand = Plus / Plus
Query: 5 tctgttgatggaaaggtcattaaggttgtttccgaccgtaaccccgtcaaccttccatnn 64
||||| ||||| |||||||| |||||||||| ||||| ||||| | |||||||||||
Sbjct: 406 tctgtcgatggcaaggtcatccaggttgtttctgaccgcaaccctgccaaccttccatgg 465
Query: 65 nnnnnagttgggattgacttggtgattgaagggactggagtttttgttgatagagatggt 124
| ||||| |||||||| |||||||||||||||||||| || || || || |||
Sbjct: 466 aaggacttggggatcgacttggtaattgaagggactggagttttcgtcgacagggaaggt 525
Query: 125 gcagggaaacacattcaggctggagccaagaaggttctaattacagctcctggaaagggt 184
|| || || ||||||||||| |||||||||||||| || |||||||| || |||||||||
Sbjct: 526 gctggcaagcacattcaggcaggagccaagaaggtgctcattacagcccccggaaagggt 585
Query: 185 gatatcccaacttatgttgttggggtaaatgctgatgcttacaatcctgctgagcctatc 244
|| |||||||| |||||||| || || ||||| |||| |||| ||| |||||||||
Sbjct: 586 gacatcccaacctatgttgtgggagtcaatgccgatggctacagcgctgacgagcctatc 645
Query: 245 atcagcaacgcttcttgcactactaattgtcttgctcccttcgtcaaggtccttgaccag 304
|||||||| |||||||||||||| || || ||||||||||| ||||||||||||||||||
Sbjct: 646 atcagcaatgcttcttgcactaccaactgccttgctccctttgtcaaggtccttgaccag 705
Query: 305 aaatttgggatcatcaagggaaccatgacaaccactcactcatacaccggtgaccaaagg 364
|||||||| ||||||||||| ||||||||||| |||||||||||||| |||||||| |||
Sbjct: 706 aaatttggcatcatcaagggtaccatgacaacaactcactcatacactggtgaccagagg 765
Query: 365 ctactcgacgccagccaccgtgacttgaggcgtgcaagagctgctgcccttaacatagtt 424
|| || |||||||| ||||| ||| | || | ||||||||||||||||||||||| |||
Sbjct: 766 ctgcttgacgccagtcaccgcgacctaagaagagcaagagctgctgcccttaacatcgtt 825
Query: 425 ccaacttcaaccggagcagcaaaggcagttgcacttgtacttccaactctcaagggtaaa 484
||||| ||||| || ||||| ||||||||||| ||||| |||||||| |||||||| |||
Sbjct: 826 ccaacatcaactggtgcagctaaggcagttgcccttgttcttccaaccctcaagggcaaa 885
Query: 485 ctaaatggcattgcattgcgtgttccaacaccaaacgtctcggtggttgatcttgtcgtt 544
|| || |||||||| ||||||||||||| ||||| ||||| || |||||||| |||||
Sbjct: 886 cttaacggcattgccctgcgtgttccaaccccaaatgtctcagttgttgatctcgtcgtc 945
Query: 545 caggtatccnnnnnnncctttgctgaagaggtaaatgcagcgttcagagaaagtgcagac 604
||||| |||| || ||||| ||||||||||| ||||| |||||||| |||
Sbjct: 946 caggtggagaaaaaaaccttcgcggaagaagtaaatgcagcattcagggaaagtgctgac 1005
Query: 605 aaggagctgaagggtattctatcagtatgcgatgagccacttgtttcagttgacttcagg 664
||||| || |||||||| || ||||| || |||||||| |||||||||||||| ||||||
Sbjct: 1006 aaggaactcaagggtatcctctcagtctgtgatgagccgcttgtttcagttgatttcagg 1065
Query: 665 tgcacagatgtttcatcaacagttgactcatccttaacaatggtgatgggagatgatatg 724
|||||||||||||||||||||||||||||||| | || ||||||||||||||||| |||
Sbjct: 1066 tgcacagatgtttcatcaacagttgactcatcactgaccatggtgatgggagatgacatg 1125
Query: 725 gtgaaggtgattgcttggtatgataatgaatggggatattctcaaagggttgttgatttg 784
|| ||||| ||||| ||||||||||| |||||||| || ||||||||||| |||||||||
Sbjct: 1126 gttaaggttattgcctggtatgataacgaatggggttactctcaaagggtcgttgatttg 1185
Query: 785 gctgacattgttgccaataactggaa 810
||||||||||||||||| ||||||||
Sbjct: 1186 gctgacattgttgccaacaactggaa 1211
>37452.m000013 glyceraldehyde 3-phosphate dehydrogenase, putative
Length = 582
Score = 56.0 bits (28), Expect = 3e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 473 ctcaagggtaaactaaatggcattgcattgcgtgttccaacaccaaacgtctcggtggtt 532
|||||||| || || |||||||||||| | ||||| ||||||||||| ||||| || |||
Sbjct: 151 ctcaagggaaagctgaatggcattgcactccgtgtcccaacaccaaatgtctcagttgtt 210
Query: 533 gatcttgt 540
|| |||||
Sbjct: 211 gaccttgt 218
Score = 56.0 bits (28), Expect = 3e-07
Identities = 94/116 (81%)
Strand = Plus / Plus
Query: 644 cttgtttcagttgacttcaggtgcacagatgtttcatcaacagttgactcatccttaaca 703
||||| |||||||||||| | |||| |||||||| || || ||||||| || || ||
Sbjct: 325 cttgtgtcagttgacttccgatgcagtgatgtttcttccaccattgactcttcattgacc 384
Query: 704 atggtgatgggagatgatatggtgaaggtgattgcttggtatgataatgaatgggg 759
||||| ||||||||||| ||||| ||||| | || ||||| || |||||||||||
Sbjct: 385 atggtcatgggagatgacatggtcaaggttgtcgcctggtacgacaatgaatgggg 440
>30170.m013796 glyceraldehyde 3-phosphate dehydrogenase, putative
Length = 1377
Score = 56.0 bits (28), Expect = 3e-07
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 248 agcaacgcttcttgcactactaattgtcttgctcccttcgtcaaggtccttgaccagaaa 307
||||| ||||||||||| || |||||||| ||||| || || |||||| | || || ||
Sbjct: 703 agcaatgcttcttgcaccacaaattgtctggctccttttgtgaaggtcatggatgaggaa 762
Query: 308 tttgggatcatcaagggaaccatgacaaccactcactcatacac 351
||||| || | |||||||| |||||||||||||| || |||||
Sbjct: 763 tttggtattgttaagggaacaatgacaaccactcattcctacac 806
Score = 56.0 bits (28), Expect = 3e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 473 ctcaagggtaaactaaatggcattgcattgcgtgttccaacaccaaacgtctcggtggtt 532
|||||||| || || |||||||||||| | ||||| ||||||||||| ||||| || |||
Sbjct: 946 ctcaagggaaagctgaatggcattgcactccgtgtcccaacaccaaatgtctcagttgtt 1005
Query: 533 gatcttgt 540
|| |||||
Sbjct: 1006 gaccttgt 1013
Score = 56.0 bits (28), Expect = 3e-07
Identities = 94/116 (81%)
Strand = Plus / Plus
Query: 644 cttgtttcagttgacttcaggtgcacagatgtttcatcaacagttgactcatccttaaca 703
||||| |||||||||||| | |||| |||||||| || || ||||||| || || ||
Sbjct: 1120 cttgtgtcagttgacttccgatgcagtgatgtttcttccaccattgactcttcattgacc 1179
Query: 704 atggtgatgggagatgatatggtgaaggtgattgcttggtatgataatgaatgggg 759
||||| ||||||||||| ||||| ||||| | || ||||| || |||||||||||
Sbjct: 1180 atggtcatgggagatgacatggtcaaggttgtcgcctggtacgacaatgaatgggg 1235