Jatropha Genome Database

JcCB0459841.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0459841.10 - phase: 0 
         (549 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m006986 alpha-2,8-sialyltransferase 8b, putative                363   e-100

>30131.m006986 alpha-2,8-sialyltransferase 8b, putative
          Length = 1347

 Score =  363 bits (183), Expect = e-100
 Identities = 335/388 (86%)
 Strand = Plus / Plus

                                                                       
Query: 65  ttgccgcttttttctctatcatcgtttttgctatccagtcctcnnnnnnngcaggtaatc 124
           ||||||||||| ||||| |  ||||||| ||||| ||||||||        ||||| |||
Sbjct: 65  ttgccgcttttctctctcttttcgttttcgctattcagtcctctttcttctcaggtgatc 124

                                                                       
Query: 125 gaaactcagatcttaacaaagaagaaatccatactttatctgaattccagttctctgttc 184
           ||| || ||||||  | ||||||||||| | |||||||||| | || || ||||||||||
Sbjct: 125 gaagcttagatctgtataaagaagaaattcgtactttatctaattttcaattctctgttc 184

                                                                       
Query: 185 agcaatgcgtggcaaacagagggcttggtctgacggcacatattgttgaccattgcaagt 244
           | ||||||||||||||||||||||| ||| |||||||||||||  |||||||||||||||
Sbjct: 185 aacaatgcgtggcaaacagagggctcggtttgacggcacatatcattgaccattgcaagt 244

                                                                       
Query: 245 taactcttaagtttcctgaagggactaacagcacctggtacaatgcgcaatttaaaattt 304
           ||||||| ||||||||   ||| ||||||||||| ||||| |||| ||||||||| ||||
Sbjct: 245 taactctcaagtttccgccaggcactaacagcacttggtataatgagcaatttaagattt 304

                                                                       
Query: 305 atgagcctttggagtatcattatgatgtttgtgatgcaattctattgtgggaacagtacc 364
            ||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 305 ttgaaccactggagtatcattatgatgtttgtgatgcaattctattgtgggaacagtatc 364

                                                                       
Query: 365 gtaacatgactacagtgctgacaagagaataccttgatgctcgtccagatgggtggttgg 424
           |||||||||| |||||||| |||||||||||||||||| |||| |||||||||||||| |
Sbjct: 365 gtaacatgaccacagtgctaacaagagaataccttgatactcggccagatgggtggttag 424

                                       
Query: 425 attatgcagcaaaaaggatcgcgcaatt 452
           | ||||||||||||||||| || |||||
Sbjct: 425 actatgcagcaaaaaggattgctcaatt 452