Jatropha Genome Database
- JcCB0458961.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0458961.10 + phase: 0 /pseudo/partial
(760 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29585.m000607 2-oxoglutarate dehydrogenase, putative 464 e-130
29585.m000604 2-oxoglutarate dehydrogenase, putative 141 7e-33
>29585.m000607 2-oxoglutarate dehydrogenase, putative
Length = 3066
Score = 464 bits (234), Expect = e-130
Identities = 316/342 (92%), Gaps = 1/342 (0%)
Strand = Plus / Plus
Query: 92 tttgaattggggttactcaatggaaagtcccaattcattagtaatctgggaagctcaatt 151
||||||||||| |||||||||||||||||||||||| | ||||||||||||||||| ||
Sbjct: 2140 tttgaattggg-ttactcaatggaaagtcccaattctctggtaatctgggaagctcagtt 2198
Query: 152 tggtgactttgctaatggggcccaagtgatatttgaccagttcctgagcagtggtgaatc 211
|||||||||| |||||||||| |||||||||||||| ||||||||||| ||||| |||||
Sbjct: 2199 tggtgacttttctaatggggctcaagtgatatttgatcagttcctgagtagtggagaatc 2258
Query: 212 aaaatggttgcgtcaaactgggctagttgtgcttcttcctcatggatatgacggtcaggg 271
||| |||||||||||||||||||| || |||||||| || ||||||||||| ||||||||
Sbjct: 2259 aaagtggttgcgtcaaactgggcttgtggtgcttctaccacatggatatgatggtcaggg 2318
Query: 272 tcctgaacattcaagtgcacggttggaacgcttccttcagatgagtgatgataatcctta 331
||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||
Sbjct: 2319 tcctgaacattcaagtgcacgattggaacgcttccttcagatgagtgatgacaacccttg 2378
Query: 332 tgttattcctgaaatggacccaactctccggaaacaaattcaggaatgtaactggcaggt 391
||| |||||||||||||| |||||||||||||| || |||||||||||||||||||||||
Sbjct: 2379 tgtgattcctgaaatggaaccaactctccggaagcagattcaggaatgtaactggcaggt 2438
Query: 392 tgtgaatgtcacaacccctgctaattacttccatgtcttgcg 433
||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 2439 tgtaaatgttacaacccctgctaattacttccatgtcttgcg 2480
Score = 414 bits (209), Expect = e-115
Identities = 272/293 (92%)
Strand = Plus / Plus
Query: 441 cctacttcgtcacaaggactgcaaatcaaatctgtctgagtttgacgatgtccaaggcca 500
||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||
Sbjct: 2535 cctacttcgtcacaaggactgcaaatcaaatttgtccgagtttgatgatgtccaaggcca 2594
Query: 501 tcctggctttgacaaacagggaaccagatttaagcgtctgataaaggatcagaatgacca 560
||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2595 ccctggatttgacaaacagggaaccagatttaagcgtttgataaaggatcagaatgacca 2654
Query: 561 tgctgatcttgaagagggtatcagacgtctggttctttgctccggaaaggtttattatga 620
| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2655 ttctgatcttgaagagggtatcagacgtctggttctttgctctggaaaggtttattatga 2714
Query: 621 gcttgatgaagaacgcaaaaagactggtgcaaaggatgttgcaatttgtagagtggagca 680
||| ||||||||||||||||||| |||||| ||||| ||||| || ||||| ||||||||
Sbjct: 2715 gctcgatgaagaacgcaaaaagattggtgccaaggacgttgccatatgtagggtggagca 2774
Query: 681 gctgtgtccattcccatatgatctgatccagcgtgagcttaagcgatatccaa 733
||||||||||||||| || ||||| ||||||||||| || || ||||||||||
Sbjct: 2775 gctgtgtccattcccctacgatctcatccagcgtgaactaaaacgatatccaa 2827
Score = 111 bits (56), Expect = 6e-24
Identities = 80/88 (90%)
Strand = Plus / Plus
Query: 2 ttcatgatcaagaaaacggggagaagtattgccctctggaccatgttgttatgaaccaag 61
||||||||||||||| ||||||||||||||||||||||| |||||| | |||||||||
Sbjct: 2024 ttcatgatcaagaaactggggagaagtattgccctctggatcatgttatcatgaaccaaa 2083
Query: 62 atgaggagatgtttactgtcagcaacag 89
|||||||||||||||| ||||| |||||
Sbjct: 2084 atgaggagatgtttaccgtcagtaacag 2111
>29585.m000604 2-oxoglutarate dehydrogenase, putative
Length = 1590
Score = 141 bits (71), Expect = 7e-33
Identities = 242/299 (80%)
Strand = Plus / Plus
Query: 138 tgggaagctcaatttggtgactttgctaatggggcccaagtgatatttgaccagttcctg 197
||||||||||||||||||||||| ||||||| | |||| ||| ||||| ||||| |||
Sbjct: 802 tgggaagctcaatttggtgacttctctaatggagttcaagcgatgtttgatcagtttctg 861
Query: 198 agcagtggtgaatcaaaatggttgcgtcaaactgggctagttgtgcttcttcctcatgga 257
|| |||| || ||||| ||||| || |||| |||||||||| | || |||||||||||
Sbjct: 862 agaggtggggagtcaaagtggttacgacaaagtgggctagttcttctgcttcctcatggt 921
Query: 258 tatgacggtcagggtcctgaacattcaagtgcacggttggaacgcttccttcagatgagt 317
||||| ||||| ||||||||||||||||| ||||| ||||| |||||||| |||||||
Sbjct: 922 tatgatggtcaaggtcctgaacattcaagcgcacgattggagtgcttccttatgatgagt 981
Query: 318 gatgataatccttatgttattcctgaaatggacccaactctccggaaacaaattcaggaa 377
||| || | || |||||| |||||| ||||| || | | || || | ||| || ||
Sbjct: 982 gataatgacccatatgttggtcctgagatggaatcatcagttcgaaagcgaatccaaaaa 1041
Query: 378 tgtaactggcaggttgtgaatgtcacaacccctgctaattacttccatgtcttgcggcg 436
|| || ||||||||||| ||||| || || ||||| |||||||| ||||| ||||||||
Sbjct: 1042 tgcaattggcaggttgttaatgttactactcctgccaattactttcatgttttgcggcg 1100
Score = 105 bits (53), Expect = 4e-22
Identities = 104/121 (85%)
Strand = Plus / Plus
Query: 510 tgacaaacagggaaccagatttaagcgtctgataaaggatcagaatgaccatgctgatct 569
||||||||| ||||||||||| ||||| || ||||||| || ||| | || |||||||
Sbjct: 1128 tgacaaacaaggaaccagattcaagcgacttgtaaaggaccaaaataatcactctgatct 1187
Query: 570 tgaagagggtatcagacgtctggttctttgctccggaaaggtttattatgagcttgatga 629
||| ||||| ||||| || ||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 1188 tgaggagggcatcaggcgactgcttctttgctctggaaaggtttattatgagcttgatga 1247
Query: 630 a 630
|
Sbjct: 1248 a 1248