Jatropha Genome Database

JcCB0458291.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0458291.10 + phase: 1 /partial
         (482 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m013741 voltage-dependent anion-selective channel, putative     155   3e-37

>30170.m013741 voltage-dependent anion-selective channel, putative
          Length = 828

 Score =  155 bits (78), Expect = 3e-37
 Identities = 354/446 (79%)
 Strand = Plus / Plus

                                                                       
Query: 37  ttgttgatttctcagcaactattggtactcccaccattgccttcggtgctgaaacttcct 96
           |||||||| |||| ||||||||||| ||||| || |||||||| ||||| || || ||||
Sbjct: 380 ttgttgatgtctctgcaactattggcactcctacaattgcctttggtgcagagacatcct 439

                                                                       
Query: 97  atgctacagcttctggtgaattttcaaagtataatgctggtgtgagctacaccagcccag 156
           || | |||||| |||| |||||| ||||||| |||||||||||| ||||| | |   |||
Sbjct: 440 atacaacagctactggcgaatttccaaagtacaatgctggtgtgcgctactcaacagcag 499

                                                                       
Query: 157 ataccaatgcttcagtgattttggctgataaaggaaactcaattaaggtttcctatctgc 216
           || | ||||| ||||| ||| |||||||||||||| | |||||| |||| || ||| |||
Sbjct: 500 attctaatgcctcagttattctggctgataaaggagattcaattcaggtatcgtatttgc 559

                                                                       
Query: 217 gtcatctggaaatgatgaatcagcttactgtagttggagagatcaaccgcacattttcca 276
            ||| |||||  |  ||||| |    ||| | |  ||   |||||  || |  || || |
Sbjct: 560 atcacctggatcttttgaataaaggcacttttggggggatgatcagtcgaaagttctcaa 619

                                                                       
Query: 277 acaacgagaacacattgacggttggatgttcttatgtagctgatcctcagactgtgctga 336
             || ||||| |||||||| |||| |||||| ||||| | ||||||||| || || ||||
Sbjct: 620 caaatgagaatacattgacagttgcatgttcctatgtggttgatcctcaaacagtactga 679

                                                                       
Query: 337 agacaaagctaaacaatcacggcagtcttggagctcttgtacagcatgagtttaaaccaa 396
           || | ||||| ||||| || |||| ||||||||||||| ||||||| ||| | || || |
Sbjct: 680 aggcgaagctcaacaaccatggcaatcttggagctcttctacagcacgagatcaacccta 739

                                                                       
Query: 397 agtccttcctaacaatttctggttccttcgacacgaaagccttgcataagaatcccaagt 456
           ||||||| || ||| |||||||||| |||||||| |||  |||||| ||||||||||| |
Sbjct: 740 agtccttactgacactttctggttctttcgacaccaaaaacttgcaaaagaatcccaaat 799

                                     
Query: 457 ttgggttggcactctctctcaagcct 482
           ||||||| ||||||||||| ||||||
Sbjct: 800 ttgggttagcactctctctgaagcct 825