Jatropha Genome Database

JcCB0456151.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0456151.10 + phase: 1 /partial/short
         (121 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29929.m004708 Signal recognition particle subunit srp72, putative      98   1e-20

>29929.m004708 Signal recognition particle subunit srp72, putative
          Length = 1995

 Score = 97.6 bits (49), Expect = 1e-20
 Identities = 82/93 (88%)
 Strand = Plus / Plus

                                                                        
Query: 29   tcaaattcaaaagcaagccaagctacaacttccaagggaactacggaacaatcaaagcct 88
            |||||||||||| ||||||||||||| | |||||| | | || | |||||||||||||||
Sbjct: 1900 tcaaattcaaaatcaagccaagctactagttccaaagcagctgcagaacaatcaaagcct 1959

                                             
Query: 89   tcatccaagtcatcaaggaagaagtccaggaat 121
            ||||||||||||||||| ||||| || ||||||
Sbjct: 1960 tcatccaagtcatcaagaaagaaatcgaggaat 1992