Jatropha Genome Database

JcCB0455931.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0455931.10 - phase: 0 
         (285 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m013657 conserved hypothetical protein                          214   2e-55

>30170.m013657 conserved hypothetical protein
          Length = 2196

 Score =  214 bits (108), Expect = 2e-55
 Identities = 225/264 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggacattggtgcccttttaacttcagctgggatcaatattgccttgtgcatcttgctt 60
           |||||||||| ||| |||||||||||||||||||||||||| |   | || ||  |||||
Sbjct: 1   atggacattgctgcacttttaacttcagctgggatcaatataggtctatgtatagtgctt 60

                                                                       
Query: 61  ttttcattatattcaatattgagaaaacaaccgagcaatagggttgtgtatttcggacgg 120
           || ||  | ||||||||||| ||||||||||| ||||| |||||||| |||||||| |||
Sbjct: 61  ttatctctctattcaatattaagaaaacaaccaagcaacagggttgtctatttcgggcgg 120

                                                                       
Query: 121 aggcttgcttcagtgcgtattaggaacaatgatttcttctccattgacagatttgtgcct 180
           ||||||||||| || || || || |||| |||||| ||||| || || ||||||||||||
Sbjct: 121 aggcttgcttcggttcgcataagaaacactgattttttctctatcgagagatttgtgcct 180

                                                                       
Query: 181 tctcctagttggatttggaaggcctgggaaacaactgaagaagaaatattggccattggc 240
           |||||||||||||||   || || ||||||||||||||||||||||| || || ||||| 
Sbjct: 181 tctcctagttggattgttaaagcttgggaaacaactgaagaagaaattttagctattggt 240

                                   
Query: 241 ggccttgatgcattggcttttcaa 264
           || |||||||||||||||||||||
Sbjct: 241 ggtcttgatgcattggcttttcaa 264