Jatropha Genome Database
- JcCB0455001.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0455001.10 - phase: 1 /pseudo/partial
(863 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30076.m004545 protoporphyrinogen oxidase, chloroplast precursor,... 523 e-148
>30076.m004545 protoporphyrinogen oxidase, chloroplast precursor,
putative
Length = 1611
Score = 523 bits (264), Expect = e-148
Identities = 450/512 (87%)
Strand = Plus / Plus
Query: 9 taccaaaaccgaagggccaaacagtaggatcttttaggaaaggacttaccatgttgcctg 68
|||||| ||||||||| |||||||||||||||||||| || ||||||| |||||||||||
Sbjct: 800 taccaacaccgaagggtcaaacagtaggatcttttagaaagggacttatcatgttgcctg 859
Query: 69 atgcaattgcaaccaggttggctagcaatgttaaattatcatggaagctttcaactatta 128
|||| ||||| | ||||||| ||||||||||||||| || ||||||||||||| |||||
Sbjct: 860 atgcgattgccaaaaggttgggtagcaatgttaaattgtcttggaagctttcaagtatta 919
Query: 129 ccaaattggataatggaggttatagtttaacatatgaaacatctgaaggattggtttccc 188
| |||||||| |||||||| |||||| |||||| ||||||| |||| || | ||||| |
Sbjct: 920 ctaaattggaaaatggagggtatagtctaacatttgaaacacctgatgggtcagtttcgc 979
Query: 189 tgcagaccaaaagtgttgtcatgacagttccatcacatattgcaagcagtctcttgaatc 248
|||| || ||||||||||| |||||||||||||| || ||||||||||| |||| |||
Sbjct: 980 tgcaaacgaaaagtgttgtaatgacagttccatcccacattgcaagcagcttcttacatc 1039
Query: 249 ctctttctgctgctgctgcagaagccctttcaaaattttattatccaccagttgcagcag 308
||||||||||||||||||| || ||||| |||||||||||||| || |||||||||||||
Sbjct: 1040 ctctttctgctgctgctgctgacgccctatcaaaattttattacccgccagttgcagcag 1099
Query: 309 tgtccatttcatatccaaaagaagccattcggacagaatgcttgattgatggtcagctta 368
|||| ||||||| |||||||| || |||||| |||||||||| || |||||| ||||||
Sbjct: 1100 tgtcagtttcatacccaaaagatgcaattcgggcagaatgcttaatagatggtgagctta 1159
Query: 369 aggggtttggtcagttgcatccacgcagccaaggggtggaaaccttaggaaccatataca 428
||||||| || |||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 1160 aggggttcggccagttgcatccacggagccaaggggtagaaacattaggaactatataca 1219
Query: 429 gctcgtcactttttccgaatcgagcaccagatggaaggattttacttttgaactacattg 488
|||| ||||||||||| ||||| ||||||| ||||||||||| || |||||||||||||
Sbjct: 1220 gctcctcactttttcccaatcgtgcaccagcaggaaggattttgctcttgaactacattg 1279
Query: 489 gaggggctaccaaccctgggattttgtccaag 520
||||||| ||||| ||||||||||||||||||
Sbjct: 1280 gaggggcgaccaatcctgggattttgtccaag 1311
Score = 303 bits (153), Expect = 9e-82
Identities = 255/289 (88%)
Strand = Plus / Plus
Query: 575 tgaacttgtagaagcagttgaccgggaattaagaaagatgctcataaaacccaatgcaaa 634
|||||||||||| ||||||||||| || || || ||||||||||||||||||||||| ||
Sbjct: 1320 tgaacttgtagaggcagttgaccgtgatttgaggaagatgctcataaaacccaatgcgaa 1379
Query: 635 ggatccatttgtactaggtgtgagagtgtggcctcaagccattccacagttcttgattgg 694
|||||||||||| ||||||||| |||||||||| |||||||||||||| |||||| ||||
Sbjct: 1380 ggatccatttgttctaggtgtgcgagtgtggccccaagccattccacaattcttggttgg 1439
Query: 695 tcattttgatatcctagatgctgcaaaaggtgctctgagggataagggcttggaagggct 754
|||||| |||||||||||| |||||||||||||||| | ||| ||||||||||||||
Sbjct: 1440 tcatttagatatcctagatagtgcaaaaggtgctctgggagatgcaggcttggaagggct 1499
Query: 755 gtttctgggcggcaactatgtatctggtgtagctttaggccggtgtgtggaaggggctta 814
|||||| || |||||||||||||| || || ||||| ||||| ||||||||||| || ||
Sbjct: 1500 gtttcttgggggcaactatgtatcaggcgttgctttgggccgatgtgtggaaggagcata 1559
Query: 815 tgaagttgctgctgaagtgaccaatttcctttcccagtatgcttataaa 863
||||||||| || || |||||||||||||| || ||| |||||||||||
Sbjct: 1560 tgaagttgcagcagaggtgaccaatttcctctcgcagaatgcttataaa 1608